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Publication Extents

Not all publications have extents, not all extents are completely accurate
Using laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) to explore geochemical taphonomy of vertebrate fossils in the upper cretaceous two medicine and Judith River formations of Montana
R.R. Rogers, H.C. Fricke, V. Addona, R.R. Canavan, C.N. Dwyer, C.L. Harwood, A.E. Koenig, R. Murray, J.T. Thole, J. Williams
2010, Palaios (25) 183-195
Laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) was used to determine rare earth element (REE) content of 76 fossil bones collected from the Upper Cretaceous (Campanian) Two Medicine (TMF) and Judith River (JRF) Formations of Montana. REE content is distinctive at the formation scale, with TMF samples exhibiting generally higher overall...
A physiologically based toxicokinetic model for methylmercury in female American kestrels
J.W. Nichols, R.S. Bennett, R. Rossmann, John B. French, K.G. Sappington
2010, Environmental Toxicology and Chemistry (29) 1854-1867
A physiologically based toxicokinetic (PBTK) model was developed to describe the uptake, distribution, and elimination of methylmercury (CH 3Hg) in female American kestrels. The model consists of six tissue compartments corresponding to the brain, liver, kidney, gut, red blood cells, and remaining carcass. Additional compartments describe the elimination of CH3Hg...
Thematic accuracy of the NLCD 2001 land cover for the conterminous United States
J.D. Wickham, S.V. Stehman, J.A. Fry, J.H. Smith, Collin G. Homer
2010, Remote Sensing of Environment (114) 1286-1296
The land-cover thematic accuracy of NLCD 2001 was assessed from a probability-sample of 15,000 pixels. Nationwide, NLCD 2001 overall Anderson Level II and Level I accuracies were 78.7% and 85.3%, respectively. By comparison, overall accuracies at Level II and Level I for the NLCD 1992 were 58% and 80%. Forest and...
Differentiating aquatic plant communities in a eutrophic river using hyperspectral and multispectral remote sensing
Y.Q. Tian, Q. Yu, M.J. Zimmerman, S. Flint, M.C. Waldron
2010, Freshwater Biology (55) 1658-1673
This study evaluates the efficacy of remote sensing technology to monitor species composition, areal extent and density of aquatic plants (macrophytes and filamentous algae) in impoundments where their presence may violate water-quality standards. Multispectral satellite (IKONOS) images and more than 500 in situ hyperspectral samples were acquired to map aquatic...
Santa Barbara Basin diatom and silicoflagellate response to global climate anomalies during the past 2200 years
J.A. Barron, D. Bukry, D. Field
2010, Quaternary International (215) 34-44
Santa Barbara Basin (SBB) diatom and silicoflagellate assemblages are quantified from a box core record spanning AD 1940-2001 and an Ocean Drilling Program Hole 893A record from ???220 BC to AD 1880. The combined relative abundance of the diatoms Fragilariopsis doliolus and Nitzschia interrupteseriata from continuous two-year sampling intervals in...
Metrics of ecosystem status for large aquatic systems: a global comparison
N.E. Dobiesz, R.E. Hecky, T.B. Johnson, J. Sarvala, J.M. Dettmers, M. Lehtiniemi, L. G. Rudstam, C.P. Madenjian, F. Witte
2010, Journal of Great Lakes Research (36) 123-138
We identified an objective set of 25 commonly available ecosystem metrics applicable across the world's large continental freshwater and brackish aquatic ecosystem. These metrics measure trophic structure, exploited species, habitat alteration, and catchment changes. We used long-term trends in these metrics as indicators of perturbations that represent an ecosystem not...
Temporal and spatial shifts in habitat use by Black Brant immediately following flightless molt
Tyler L. Lewis, Paul L. Flint, Joel A. Schmutz, Dirk V. Derksen
2010, Wilson Journal of Ornithology (122) 484-493
Each year thousands of Pacific Black Brant (Branta bernicla nigricans) undergo flightless wing molt in the Teshekpuk Lake Special Area (TLSA), Alaska, in two distinct habitats: inland, freshwater lakes and coastal, brackish wetlands. Brant lose body mass during wing molt and likely must add reserves upon regaining flight to help...
Repeated use of an abandoned vehicle by nesting Turkey vultures (Cathartes aura)
L.D. Igl, S.L. Peterson
2010, Journal of Raptor Research (44) 73-75
Turkey Vultures (Cathartes aura) lay their eggs on an existing substrate in the dark recesses of a variety of natural sites (Kirk and Mossman 1998). Although an important requirement of Turkey Vulture nest-site selection is isolation from human disturbances (<a class="ref"...
Effects of 3D random correlated velocity perturbations on predicted ground motions
S. Hartzell, S. Harmsen, A. Frankel
2010, Bulletin of the Seismological Society of America (100) 1415-1426
Three-dimensional, finite-difference simulations of a realistic finite-fault rupture on the southern Hayward fault are used to evaluate the effects of random, correlated velocity perturbations on predicted ground motions. Velocity perturbations are added to a three-dimensional (3D) regional seismic velocity model of the San Francisco Bay Area using a 3D von...
Poroelastic stress-triggering of the 2005 M8.7 Nias earthquake by the 2004 M9.2 Sumatra-Andaman earthquake
K.L.H. Hughes, Timothy Masterlark, Walter D. Mooney
2010, Earth and Planetary Science Letters (293) 289-299
The M9.2 Sumatra-Andaman earthquake (SAE) occurred three months prior to the M8.7 Nias earthquake (NE). We propose that the NE was mechanically triggered by the SAE, and that poroelastic effects were a major component of this triggering. This study uses 3D finite element models (FEMs) of the Sumatra-Andaman subduction zone...
Determination of stress parameters for eight well-recorded earthquakes in eastern North America
D.M. Boore, K.W. Campbell, G. M. Atkinson
2010, Bulletin of the Seismological Society of America (100) 1632-1645
We determined the stress parameter, Δσ, for the eight earthquakes studied by Atkinson and Boore (2006), using an updated dataset and a revised point-source stochastic model that captures the effect of a finite fault. We consider four geometrical-spreading functions, ranging from 1/R at all distances to two- or three-part functions....
Sexing California gulls using morphometrics and discriminant function analysis
Garth Herring, Joshua T. Ackerman, Collin A. Eagles-Smith, John Y. Takekawa
2010, Waterbirds (33) 79-85
A discriminant function analysis (DFA) model was developed with DNA sex verification so that external morphology could be used to sex 203 adult California Gulls (Larus californicus) in San Francisco Bay (SFB). The best model was 97% accurate and included head-to-bill length, culmen depth at the gonys, and wing length....
Liana habitat and host preferences in northern temperate forests
S. A. Leicht-Young, N.B. Pavlovic, K.J. Frohnapple, R. Grundel
2010, Forest Ecology and Management (260) 1467-1477
Lianas and other climbers are important ecological and structural components of forest communities. Like other plants, their abundance in a given habitat depends on a variety of factors, such as light, soil moisture and nutrients. However, since lianas require external support, host tree characteristics also influence their distribution. Lianas are...
Post-eruption legacy effects and their implications for long-term recovery of the vegetation on Kasatochi Island, Alaska
Stephen S. Talbot, Sandra Looman Talbot, Lawrence R. Walker
2010, Arctic, Antarctic, and Alpine Research (42) 285-296
We studied the vegetation of Kasatochi Island, central Aleutian Islands, to provide a general field assessment regarding the survival of plants, lichens, and fungi following a destructive volcanic eruption that occurred in 2008. Plant community data were analyzed using multivariate methods to explore the relationship between pre- and post-eruption plant...
Tuning stochastic matrix models with hydrologic data to predict the population dynamics of a riverine fish
P.C. Sakaris, E.R. Irwin
2010, Ecological Applications (20) 483-496
We developed stochastic matrix models to evaluate the effects of hydrologic alteration and variable mortality on the population dynamics of a lotie fish in a regulated river system. Models were applied to a representative lotic fish species, the flathead catfish (Pylodictis olivaris), for which two populations were examined: a native...
A palynological biozonation for the uppermost Santonian and Campanian Stages (Upper Cretaceous) of South Carolina, USA
R. A. Christopher, D.C. Prowell
2010, Cretaceous Research (31) 101-129
Five palynological biozones are proposed for the uppermost Santonian and Campanian Stages of South Carolina. In ascending stratigraphic order, these highest-occurrence interval zones are the Osculapollis vestibulus (Ov) Biozone, the Holkopollenites propinquus (Hp) Biozone, the Holkopollenites forix (Hf) Biozone, the Complexiopollis abditus (Ca) Biozone, and the Osculapollis aequalis (Oa) Biozone....
Mapping elevations of tidal wetland restoration sites in San Francisco Bay: Comparing accuracy of aerial lidar with a singlebeam echosounder
N.D. Athearn, John Y. Takekawa, B. Jaffe, B.J. Hattenbach, A.C. Foxgrover
2010, Journal of Coastal Research (26) 312-319
The southern edge of San Francisco Bay is surrounded by former salt evaporation ponds, where tidal flow has been restricted since the mid to late 1890s. These ponds are now the focus of a large wetland restoration project, and accurate measurement of current pond bathymetry and adjacent mud flats has...
Statistical assessment of DNA extraction reagent lot variability in real-time quantitative PCR
R.N. Bushon, C.M. Kephart, G. F. Koltun, D.S. Francy, F. W. Schaefer III, H.D. Alan Lindquist
2010, Letters in Applied Microbiology (50) 276-282
Aims: The aim of this study was to evaluate the variability in lots of a DNA extraction kit using real-time PCR assays for Bacillus anthracis, Francisella tularensis and Vibrio cholerae. Methods and Results: Replicate aliquots of three bacteria were processed in duplicate with three different lots of a commercial DNA...
Quantifying restoration success and recovery in a metal-polluted stream: A 17-year assessment of physicochemical and biological responses
W.H. Clements, N.K.M. Vieira, S. E. Church
2010, Journal of Applied Ecology (47) 899-910
Evaluating the effectiveness of stream restoration is often challenging because of the lack of pre-treatment data, narrow focus on physicochemical measures and insufficient post-restoration monitoring. Even when these fundamental elements are present, quantifying restoration success is difficult because of the challenges associated with distinguishing treatment effects from seasonal variation, episodic...
Empirical evaluation of predator-driven diel vertical migration in Lake Superior
J.D. Stockwell, T.R. Hrabik, O.P. Jensen, D.L. Yule, M. Balge
2010, Canadian Journal of Fisheries and Aquatic Sciences (67) 473-485
Recent studies on Lake Superior suggest that diel vertical migration (DVM) of prey (generalized Coregonus spp.) may be influenced by the density of predatory siscowet (Salvelinus namaycush). We empirically evaluated this hypothesis using data from acoustic, midwater trawl, and bottom trawl sampling at eight Lake Superior sites during three seasons...
Evolution of a natural debris flow: In situ measurements of flow dynamics, video imagery, and terrestrial laser scanning
S.W. McCoy, J. W. Kean, J. A. Coe, D.M. Staley, T.A. Wasklewicz, G.E. Tucker
2010, Geology (38) 735-738
Many theoretical and laboratory studies have been undertaken to understand debris-flow processes and their associated hazards. However, complete and quantitative data sets from natural debris flows needed for confirmation of these results are limited. We used a novel combination of in situ measurements of debris-flow dynamics, video imagery, and pre-...
The influence of maximum magnitude on seismic-hazard estimates in the Central and Eastern United States
C.S. Mueller
2010, Bulletin of the Seismological Society of America (100) 699-711
I analyze the sensitivity of seismic-hazard estimates in the central and eastern United States (CEUS) to maximum magnitude (mmax) by exercising the U.S. Geological Survey (USGS) probabilistic hazard model with several mmax alternatives. Seismicity-based sources control the hazard in most of the CEUS, but data seldom provide an objective basis...
Updating the 2001 National Land Cover Database Impervious Surface Products to 2006 using Landsat imagery change detection methods
George Xian, Collin G. Homer
2010, Remote Sensing of Environment (114) 1676-1686
A prototype method was developed to update the U.S. Geological Survey (USGS) National Land Cover Database (NLCD) 2001 to a nominal date of 2006. NLCD 2001 is widely used as a baseline for national land cover and impervious cover conditions. To enable the updating of this database in an optimal...
Carbon dioxide emission factors for U.S. coal by origin and destination
J.C. Quick
2010, Environmental Science & Technology (44) 2709-2714
This paper describes a method that uses published data to calculate locally robust CO2 emission factors for U.S. coal. The method is demonstrated by calculating CO2 emission factors by coal origin (223 counties, in 1999) and destination (479 power plants, in 2005). Locally robust CO2 emission factors should improve the...
Spectral assessment of new ASTER SWIR surface reflectance data products for spectroscopic mapping of rocks and minerals
J.C. Mars, L. C. Rowan
2010, Remote Sensing of Environment (114) 2011-2025
ASTER reflectance spectra from Cuprite, Nevada, and Mountain Pass, California, were compared to spectra of field samples and to ASTER-resampled AVIRIS reflectance data to determine spectral accuracy and spectroscopic mapping potential of two new ASTER SWIR reflectance datasets: RefL1b and AST_07XT. RefL1b is a new reflectance dataset produced for this...