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Publication Extents

Not all publications have extents, not all extents are completely accurate
High resolution lidar data shed light on inter-island translocation of endangered bird species in the Hawaiian Islands
Erica M. Gallerani, Jeffrey Burgett, Nicolas R. Vaughn, Lucas Berio Fortini, Geoffrey A. Fricker, Hanna L. Mounce, Thomas W. Gillespie, Lisa H. Crampton, David Knapp, Justin M. Hite, Roy Gilb
2023, Ecological Applications (33)
Translocation, often a management solution reserved for at-risk species, is a highly time-sensitive intervention in the face of a rapidly changing climate. The definition of abiotic and biotic habitat requirements is essential to the selection of appropriate release sites in novel environments. However, field-based...
Bayesian forecasting of disease spread with little or no local data
Jonathan D Cook, David M. Williams, Daniel P. Walsh, Trevor J. Hefley
2023, Scientific Reports (13)
Rapid and targeted management actions are a prerequisite to efficiently mitigate disease outbreaks. Targeted actions, however, require accurate spatial information on disease occurrence and spread. Frequently, targeted management actions are guided by non-statistical approaches that define the affected area by a pre-determined distance surrounding a small...
Rupture directivity of the 25 October 2022 Mw 5.1 Alum Rock earthquake
Evan Tyler Hirakawa, Grace Alexandra Parker, Annemarie S. Baltay, Thomas C. Hanks
2023, The Seismic Record (3) 144-155
The 25 October 2022 Mw 5.1 Alum Rock earthquake shows strong evidence for southeast rupture directivity along the central Calaveras fault (CCF), as indicated by observed ground motions and simulated kinematic ruptures. Peak ground accelerations (PGAs) and peak ground velocities (PGVs) are notably higher to the southeast, with an order...
Nest attendance, incubation constancy, and onset of incubation in dabbling ducks
C. Alex Hartman, Joshua T. Ackerman, Sarah H. Peterson, Brady Lynn Fettig, Michael L. Casazza, Mark P. Herzog
2023, PLoS ONE (18)
In birds, parents must provide their eggs with a safe thermal environment suitable for embryonic development. Species with uniparental incubation must balance time spent incubating eggs with time spent away from the nest to satisfy self-maintenance needs. Patterns of nest attendance, therefore, influence embryonic development and the time it takes...
Use of environmental DNA to assess American Eel distribution, abundance, and barriers in a river-canal system
Scott D. George, Barry P. Baldigo, Christopher B. Rees, Meredith L. Bartron, John J. Wiley Jr., Daniel S. Stich, Scott M. Wells, Dylan R. Winterhalter
2023, Transactions of the American Fisheries Society (152) 310-326
Objective: The American Eel Anguilla rostrata historically was one of the most common fish species in Atlantic coast watersheds, but extensive dam construction and other factors caused a widespread population decline. One of the watersheds where American Eels have declined considerably is the Mohawk River in eastern and central...
Watershed carbon yield derived from gauge observations and river network connectivity in the United States
Han Qiu, Xuesong Zhang, Anni Yang, Kimberly Wickland, Edward G. Stets, Min Chen
2023, Scientific Data (10)
River networks play a critical role in the global carbon cycle. Although global/continental scale riverine carbon cycle studies demonstrate the significance of rivers and streams for linking land and coastal regions, the lack of spatially distributed riverine carbon load data represents a gap for quantifying riverine carbon net gain or...
Simulation of flow and eutrophication in the central Salem River, New Jersey
Frederick J. Spitz, Vincent T. DePaul
2023, Scientific Investigations Report 2022-5047
The central Salem River in New Jersey is subject to periods of water-quality impairment, marked by elevated concentrations of phosphorus and chlorophyll-a, and low concentrations of and large diurnal swings in concentrations of dissolved oxygen. These seasonal eutrophic conditions are controlling factors for water quality in lower reaches, where the...
Mapping landslide susceptibility over large regions with limited data
Jacob Bryson Woodard, Benjamin B. Mirus, Matthew Crawford, Dani Or, Ben Leshchinsky, Kate E. Allstadt, Nathan J. Wood
2023, Journal of Geophysical Research: Earth Surface (128)
Landslide susceptibility maps indicate the spatial distribution of landslide likelihood. Modeling susceptibility over large or diverse terrains remains a challenge due to the sparsity of landslide data (mapped extent of known landslides) and the variability in triggering conditions. Several different data sampling strategies of landslide locations used to train a...
Heavy: Software for forward-modeling gravity change from MODFLOW output
Jeffrey R. Kennedy, Joshua Larsen
2023, Environmental Modelling and Software (165)
Fortran software, named Heavy, was developed to simulate gravity change due to water-storage change in MODFLOW groundwater models. Heavy is compatible with MODFLOW-2005 and MODFLOW-NWT models using the layer-property flow or upstream weighting packages. All of the necessary information for the gravity calculation—the geometry of the model cells, the storage...
Future climate-induced changes in mixing and deep oxygen content of a caldera lake with hydrothermal heat and salt inputs
Tamara M. Wood, Susan Wherry, Sebastiano Piccolroaz, Scott F Girdner
2023, Journal of Great Lakes Research (49) 563-580
Vertical profiles of temperature, salinity and dissolved oxygen in Crater Lake, a caldera lake in the Oregon Cascade Range that receives hydrothermal inputs of heat and salt, were simulated with a 1-dimensional model. Twelve Global Circulation Models and two Representative Concentration Pathways (RCPs) were used to develop boundary conditions from...
Spatial and temporal variability in summertime dissolved carbon dioxide and methane in temperate ponds and shallow lakes
Nicholas E. Ray, Meredith Holgerson, Mikkel Rene Andersen, Janis Bikse, Lauren E Bortolotti, Martyn N. Futter, Ilga Kokorite, Alan Law, Cory P. McDonald, Jorrit Mesman, Mike Peacock, David Richardson, Julien Arsenault, Sheel Bansal, Kaelin M Cawley, Kerri Finlay, McKenzie A. Kuhn, Amir Reza Shahabinia, Facundo Smufer
2023, Limnology and Oceanography (68) 1530-1545
Small waterbodies have potentially high greenhouse gas emissions relative to their small footprint on the landscape, although there is high uncertainty in model estimates. Scaling their carbon dioxide (CO2) and methane (CH4) exchange with the atmosphere remains challenging due to an incomplete understanding and...
Range-wide population trend analysis for greater sage-grouse (Centrocercus urophasianus)—Updated 1960–2022
Peter S. Coates, Brian G. Prochazka, Cameron L. Aldridge, Michael S. O’Donnell, David R. Edmunds, Adrian P. Monroe, Steve E. Hanser, Lief A. Wiechman, Michael P. Chenaille
2023, Data Report 1175
Greater sage-grouse (Centrocercus urophasianus) are at the center of state and national land-use policies largely because of their unique life-history traits as an ecological indicator for health of sagebrush ecosystems. This updated population trend analysis provides state and federal land and wildlife managers with best-available science to help guide current...
Bioaccumulation kinetics of model pharmaceuticals in the freshwater unionid pondmussel, Sagittunio subrostratus
S. Rebekah Burket, Jaylen L. Sims, Rebecca A. Dorman, Nile E. Kemble, Eric Brunson, Jeffery A. Steevens, Bryan W. Brooks
Eric Brunson, editor(s)
2023, Environmental Toxicology and Chemistry (42) 1183-1189
Bioaccumulation of ionizable pharmaceuticals has been increasingly studied, with most reported aquatic tissue concentrations in field or laboratory experiments being from fish. However, higher levels of antidepressants have been observed in bivalves compared with fish from effluent-dominated and dependent surface waters. Such observations may be important for biodiversity because approximately...
Supervised versus unsupervised approaches to classification of accelerometry data
Maitreyi Sur, Jonathan C. Hall, Joseph Brandt, Molly Astell, Sharon A. Poessel, Todd E. Katzner
2023, Ecology and Evolution (13)
Sophisticated animal-borne sensor systems are increasingly providing novel insight into how animals behave and move. Despite their widespread use in ecology, the diversity and expanding quality and quantity of data they produce have created a need for robust analytical methods for biological interpretation. Machine learning tools are often used to...
Relative contributions of water-level components to extreme water levels along the US Southeast Atlantic Coast from a regional-scale water-level hindcast
Kai Alexander Parker, Li H. Erikson, Jennifer Anne Thomas, Cornelis M. Nederhoff, Patrick L. Barnard, Sanne Muis
2023, Natural Hazards (117) 2219-2248
A 38-year hindcast water level product is developed for the U.S. Southeast Atlantic coastline from the entrance of Chesapeake Bay to the southeast tip of Florida. The water level modelling framework utilized in this study combines a global-scale hydrodynamic model (Global Tide and Surge Model, GTSM-ERA5), a novel ensemble-based tide...
Spatial variability in vertical accretion and carbon sequestration in salt marsh soils of an urban estuary
Hongqing Wang, Gregg Snedden, Ellen K. Hartig, Q. Chen
2023, Wetlands (43)
Salt marshes in New York City’s Jamaica Bay have been disappearing and deteriorating since early 1900s, resulting in the loss of long-term accumulated carbon storage. However, the spatial variations and mechanisms in vertical accretion and soil organic carbon (SOC) sequestration across this highly urbanized estuary remains unclear. In this study,...
Breaking plates: Creation of the East Anatolian fault, the Anatolian plate, and a tectonic escape system
Donna Whitney, Jonathan Delph, Stuart N. Thomson, Susan L. Beck, Gilles Brocard, M. Cosca, Michael H. Darin, Nuretdin Kaymakci, Maud J.M. Meijers, Aral Okay, Bora Rojay, Christian Teyssier, Paul J. Umhoefer
2023, Geology (51) 673-677
Lateral movement of lithospheric fragments along strike-slip faults in response to collision (escape tectonics) has characterized convergent settings since the onset of plate tectonics and is a mechanism for the formation of new plates. The Anatolian plate was created by the sequential connection of strike-slip faults following ≥10 m.y. of...
Rapid modeling of compound flooding across broad coastal regions and the necessity to include rainfall driven processes: A case study of Hurricane Florence (2018)
Tim Leijnse, Cornelis M. Nederhoff, Jennifer Anne Thomas, Kai Alexander Parker, Maarten van Ormondt, Li H. Erikson, Robert T. McCall, Ap van Dongeren, Andrea C. O'Neill, Patrick L. Barnard
Ping Wang, Elizabeth Royer, Julie D. Rosati, editor(s)
2023, Conference Paper, Coastal Sediments 2023: Proceedings of the Coastal Sediments 2023
In this work, we show that large-scale compound flood models developed for North and South Carolina, USA, can skillfully simulate multiple drivers of coastal flooding as confirmed by measurements collected during Hurricane Florence (2018). Besides the accuracy of representing observed water levels, the importance of individual processes was investigated. We...
Rift basins and intraplate earthquakes: New high-resolution aeromagnetic data provide insights into buried structures of the Charleston, South Carolina seismic zone
Anjana K. Shah, Thomas L. Pratt, J. Wright Horton, Jr.
2023, Geochemistry, Geophysics, Geosystems (24)
The delineation of faults that pose seismic risk in intraplate seismic zones and the mapping of features associated with failed rift basins can help our understanding of links between the two. We use new high-resolution aeromagnetic data, previous borehole sample information, and reprocessed seismic reflection profiles to image subsurface structures...
Incorporating wave climate complexity into modeling lower shoreface morphology and transport
Megan Gillen, Andrew D. Ashton, Jennifer L. Miselis, Daniel J. Ciarletta, Emily A. Wei, Christopher R. Sherwood
Ping Wang, Elizabeth Royer, Julie D. Rosati, editor(s)
2023, Conference Paper, Coastal Sediments 2023, proceedings of the 10th international conference
The lower shoreface, a transitional subaqueous region extending from the seaward limit of the surf zone to beyond the closure depth, serves as a sediment reservoir and pathway in sandy beach environments over annual to millennial time scales. Despite the important role this region plays in shoreline dynamics, the morphodynamics...
Guidance for parameterizing post-fire hydrologic models with in situ infiltration measurements
T. Liu, Luke A. McGuire, Ann Youberg, Alexander N. Gorr, Francis K. Rengers
2023, Earth Surface Processes and Landforms (48) 2368-2386
Wildfire can alter soil-hydraulic properties, often resulting in an increased prevalence of infiltration-excess overland flow and greater potential for debris-flow hazards. Mini disk tension infiltrometers (MDIs) can be used to estimate soil hydraulic properties, such as field-saturated hydraulic conductivity (Kfs) and wetting front potential...
Assessing environmental oil spill based on fluorescence images of water samples and deep learning
D. P. Liu, Ming Liu, Guangyu Sun, Zhiqian Zhou, Duolin Wang, Fei He, Jiaxin Li, Jiacheng Xie, Ryan Gettler, Eric Brunson, Jeffery A. Steevens, Dong Xu
2023, Journal of Environmental Informatics (42) 1-12
Measuring oil concentration in the aquatic environment is essential for determining the potential exposure, risk, or injury for oil spill response and natural resource damage assessment. Conventional analytical chemistry methods require samples to be collected in the field, shipped, and processed in the laboratory, which is also rather time-consuming, laborious,...
New capabilities in MT3D-USGS for simulating unsaturated-zone heat transport
Eric D. Morway, Daniel T. Feinstein, Randall J. Hunt, Richard W. Healy
2023, Groundwater (61) 330-345
Changes in climate and land use will alter groundwater heat transport dynamics in the future. These changes will in turn affect watershed processes (e.g., nutrient cycling) as well as watershed characteristics (e.g., distribution and persistence of cold-water habitat). Thus, groundwater flow and heat transport models at watershed scales that...
A multi-level modeling approach to guide management of female feral hogs in Great Smoky Mountains National Park
Frances E. Buderman, Patrick J. Helm, Joseph D. Clark, Ryan H. Williamson, Joseph G. Yarkovich, Jennifer M. Mullinax
2023, Biological Invasions (25) 3065-3082
We trapped, anesthetized, and fit 16 female feral swine (Sus scrofa) with Global Positioning System (GPS) collars in Great Smoky Mountains National Park (GRSM) to develop predictive summer and winter models for more effective population control efforts. Given the highly diverse habitat and topography in GRSM...
Assessing potential effects of changes in water use in the middle Carson River Basin with a numerical groundwater-flow model, Eagle, Dayton, and Churchill Valleys, west-central Nevada
Eric D. Morway, Susan G. Buto, Richard G. Niswonger, Justin L. Huntington
2023, Scientific Investigations Report 2023-5008
During the economic boom of the mid part of the first decade of the 2000s in northwestern Nevada, municipal and housing growth increased use of the water resources of this semi-arid region. In 2008, when the economy slowed, new housing development stopped, and immediate pressure on groundwater resources abated. The...