Network of networks: Time series clustering of AmeriFlux sites
David E. Reed, Housen Chu, Brad G. Peter, Jiquan Chen, Michael Abraha, Brian Amiro, Ray G. Anderson, M. Altaf Arain, Paulo Arruda, Greg A. Barron-Gafford, Carl Bernacchi, Daniel P. Beverly, Sebastien C. Biraud, T. Andrew Black, Peter D. Blanken, Gil Bohrer, Rebecca Bowler, David R. Bowling, M. Syndonia Bret-Harte, Mario Bretfeld, Nathaniel A. Brunsell, Stephen H. Bullock, Gerardo Celis, Xingyuan Chen, Aimee T. Classen, David R. Cook, Alejandro Cueva, Higo J. Dalmagro, Kenneth J. Davis, Ankur Desai, Alison J. Duff, Allison L. Dunn, David Durden, Colin W. Edgar, Eugenie Euskirchen, Rosvel Bracho, Brent E. Ewers, Lawrence B. Flanagan, Christopher R. Florian, Vanessa Foord, Inke Forbrich, Brandon R. Forsythe, John Frank, Jaime Garatuza-Payan, Sarah Goslee, Christopher M. Gough, Mark B. Green, Timothy Griffis, Manuel Helbig, Andrew C. Hill, Ross Hinkle, Jason Horne, Elyn Humphreys, Hiroki Ikawa, Go Iwahana, Rachhpal Jassal, Bruce K. Johnson, Mark S. Johnson, Steven A. Kannenberg, Eric Kelsey, John King, John F. Knowles, Sara Knox, Hideki Kobayashi, Thomas Kolb, Randy Kolka, Ken Krauss, Lars Kutzbach, Brian T. Lamb, Beverly E. Law, Sung-Ching Lee, Xuhui Lee, Heping Liu, Henry W. Loescher, Sparkle L. Malone, Roser Matamala, Marguerite Mauritz, Stefan Metzger, Gesa Meyer, Bhaskar Mitra, J. William Munger, Zoran Nesic, Asko Noormets, Thomas L. O'Halloran, Patrick T. O'Keeffe, Steven F. Oberbauer, Walter Oechel, Patty Oikawa, Paulo C. Olivas, Andrew Ouimette, Gilberto Pastorello, Jorge F. Perez-Quezada, Claire Phillips, Gabriela Posse, Bo Qu, William L. Quinton, Michele L. Reba, Andrew D. Richardson, Valentin Picasso, Adrian V. Rocha, Julio C. Rodriguez, Roel Ruzol, Scott Saleska, Russell L. Scott, Adam P. Schreiner-McGraw, Edward A.G. Schuur, Maria Silveira, Oliver Sonnentag, David L. Spittlehouse, Ralf Staebler, Gregory Starr, Christina Staudhammer, Chris Still, Cove Sturtevant, Ryan C. Sullivan, Andy Suyker, David Trejo, Masahito Ueyama, Rodrigo Vargas, Brian Viner, Enrique R. Vivoni, Dong Wang, Eric J. Ward, Susanne Wiesner, Lisamarie Windham-Myers, David Yannick, Enrico A. Yepez, Terenzio Zenone, Junbin Zhao, Donatella Zona
2025, Agricultural and Forest Meteorology (372)
Environmental observation networks, such as AmeriFlux, are foundational for monitoring ecosystem response to climate change, management practices, and natural disturbances; however, their effectiveness depends on their representativeness for the regions or continents. We proposed an empirical, time series approach to quantify the similarity of ecosystem fluxes across AmeriFlux sites. We...
Select elements of concern in surface water of three hydrologic basins (Delaware River, Illinois River, and Upper Colorado River)—Data screening for the development of spatial and temporal models
Mark C. Marvin-DiPasquale, R. Blaine McCleskey, Samantha L. Sullivan, Jonathan Casey Root, Serena M. Seawolf, Katherine M. Ransom, Susan Wherry, Evangelos Kakouros, Shaun Baesman
2025, Open-File Report 2025-1033
The report focuses on the screening of previously published concentration data associated with 12 elements of concern (aluminum, arsenic, cadmium, chromium, copper, iron, mercury, manganese, lead, selenium, uranium, and zinc) measured in stream surface waters of three hydrologic basins (Delaware River Basin, Illinois River Basin, and the Upper Colorado River...
Widespread thiamine deficiency in California salmon linked to an anchovy-dominated marine prey base
Nate Mantua, Heather M. Bell, Anne E. Todgham, Miles E. Daniels, Jacques Rinchard, Jarrod R. Ludwig, John Field, Steven T Lindley, Freya Elizabeth Rowland, Catherine A. Richter, David Walters, Bruce P. Finney, Anne R. Distajo Haskell, Donald Tillitt, Dale C. Honeyfield, Taylor N. Lipscomb, Kevin Kwak, Jason Kindopp, Dennis E. Cocherell, Abigail Ward, Thomas H. Williams, Jeff Harding, Nann A. Fangue, Carson Jeffres, Rocio Iliana Ruiz-Cooley, Steven Litvin, Scott Foott, Mark Adkison, Brett Kormos, Peggy Harte, Frederick S. Colwell, Christopher P. Suffridge, Kelly Shannon, Amanda Cranford, Charlotte Ambrose, Aimee N. Reed, Rachel C. Johnson
2025, Proceedings of the National Academy of Sciences (122)
Thiamine (vitamin B1) deficiency in marine systems is a globally significant threat to marine life. In 2020, newly hatched Chinook salmon (Oncorhynchus tshawytscha) fry in California’s Central Valley (CCV) hatcheries swam in corkscrew patterns and died at unusually high rates due to a lack of this essential vitamin. We subsequently...
Automated methods for processing camera trap video data for distance sampling
Trevor Bak, Richard J. Camp, Matthew D. Burt, Scott Vogt
2025, Pacific Conservation Biology (31)
ContextPopulation monitoring is an essential need for tracking biodiversity and judging efficacy of conservation management actions, both globally and in the Pacific. However, population monitoring efforts are often temporally inconsistent and limited to small scales. Motion-activated cameras (‘camera traps’) offer a way to cost-effectively monitor populations, but they also generate large...
Leveraging wildfire to augment forest management and amplify forest resilience
Kristen I. Shive, Clarke Alexandra Knight, Zachary L Steel, Charlotte K. Stanley, Kristen N. Wilson
2025, Ecosphere (16)
Successive catastrophic wildfire seasons in western North America have escalated the urgency around reducing fire risk to communities and ecosystems. In historically frequent-fire forests, fuel buildup as a result of fire exclusion is contributing to increased fire severity. The probability of high-severity fire can be reduced by active forest management...
Impact of gas/liquid phase change of CO2 during injection for sequestration
M. Karimi, Elizabeth S. Cochran, Mehrdad Massoudi, Noel Walkington, Matteo Pozzi, Kaushik Dayal
2025, Journal of the Mechanics and Physics of Solids (203)
CO2 sequestration in deep saline formations is an effective and important process to control the rapid rise in CO2 emissions. The process of injecting CO2 requires reliable predictions of the stress in the formation and the fluid pressure distributions – particularly since monitoring of the CO2 migration is difficult –...
Multiscale framework for assessing land cover change on barrier islands from extreme storms and restoration
Nicholas Enwright, P. Soupy Dalyander, Casey M. Stuht, Minoo Han, Margaret L. Palmsten, Theresa M. Davenport, Christopher J. Kingwill, Gregory Steyer, Megan La Peyre
2025, Journal of Coastal Research (41) 1029-1042
Often found along the estuarine-marine interface, barrier islands and mainland coastal zones are shaped by tides, currents, extreme storms, and relative sea-level rise. These systems provide ecosystem services such as storm surge and wave attenuation, erosion protection to inland areas, habitat for fish and wildlife, recreation, and tourism. Given the...
Numerical simulation of sound-side barrier-island inundation and breaching during Hurricane Dorian (2019)
John C. Warner, Christopher R. Sherwood, Christie A. Hegermiller, Zafer Defne, Joseph B. Zambon, Ruoying He, George Xue, Daoyang Bao, Dongxiao Yin, Melissa Moulton
2025, JGR Earth Surface (130)
Hurricane-induced morphological changes and associated community hazards along sandy, barrier-island coastlines have been studied primarily from the perspective of ocean-side attack by storm-driven ocean surge and large waves. Thus, our understanding of long-term barrier island morphological change focuses on beach erosion, overwash, and inlet formation. In contrast, outwash events with...
Near-surface geophysics: Environmental applications
Stephanie R. James, Dan R. Glaser, Alejandro Garcia
2025, Book chapter, Oxford Bibliographies
The field of geophysics encompasses a broad and diverse compilation of methodologies that employs principles of physics to characterize properties of earth materials within the subsurface. While geophysical methods have a long history in resource exploration and studies of Earth’s interior, the subdiscipline of “near-surface geophysics” has evolved in recent...
Streamflow regime characterization in the changing boreal ecosystem: Wildfire impacts from stream-to-regional scales
Deanna D. Strohm, Christopher J. Sergeant, Josh D. Paul, Jeffrey A. Falke
2025, Science of the Total Environment (991)
The boreal ecosystem has experienced significant changes over recent decades as wildfires become more frequent, intense, and severe. As streams are highly prevalent and ecologically relevant, understanding interactions among wildfire and hydrologic patterns is important for effective aquatic ecosystem management. This study used a Bayesian mixture model to classify streamflow regimes...
Disparate groundwater responses to wildfire
Michelle A. Walvoord, Brian A. Ebel, Trevor Fuess Partridge, David M. Rey, D.O. Rosenberry
2025, WIREs Water (12)
Post-wildfire investigations of groundwater response reveal a range of outcomes, varying from substantial increases to notable decreases in recharge and baseflow, with some studies indicating negligible or short-lived effects. This review assesses these varied responses within five critical categories: climate, vegetation, hydrogeology, fire characteristics, and the cryosphere, examining both short-term...
Public supply water delivery analysis and estimation for the conterminous United States
Joshua Larsen, Ayman H. Alzraiee, Richard G. Niswonger, Donald Martin, Cheryl A. Buchwald, Cheryl A. Dieter, Carol L. Luukkonen, Jana S. Stewart, Scott Paulinski, Lisa D. Miller, Natalie Houston
2025, Water Resources Research (61)
Public supply water withdrawals represent 14% of all withdrawals in the conterminous United States (CONUS), supplying approximately 87% of the population with fresh water. Deliveries for public water supply are crucial for associating water use amounts with populations because they often differ from total withdrawals due to wholesales, transfers, losses,...
Rapid emplacement of the Keaiwa Lava Flow of 1823 from the Great Crack in the Southwest Rift Zone of Kilauea volcano
Andrea Tonato, Thomas Shea, Drew T. Downs, Karim Kelfoun
2025, Journal of Volcanology and Geothermal Research (466)
The Keaīwa Lava Flow of 1823 in the Southwest Rift Zone of Kīlauea volcano is unusual for its expansive pāhoehoe sheet flow morphology and lack of constructive vent topography, despite having a similar tholeiitic basalt composition to other lavas erupted from Kīlauea. This lava flow issued from a ∼10-km-long continuous fissure...
Navigating the possibilities and pitfalls of biocrust recovery in a changing climate
Michala Lee Phillips, Kristina E. Young, Cara Marie Lauria, Sierra Jech, Ana Giraldo-Silva, Sasha C. Reed
2025, American Journal of Botany (112)
Biological soil crusts are complex communities composed of lichens, mosses, bacteria, and cyanobacteria that create a living skin on the soil surface across drylands worldwide. Although small in size, the vast area that biocrusts cover and the critical functions they provide make them a cornerstone of dryland health and resiliency....
Discovery of an intact Quaternary paleosol, Georgia Bight, USA
Ervan G. Garrison, Matthew Newton, Benjamin Prueitt, Emily C. Jones, Debra A. Willard
2025, Applied Sciences (15)
A previously buried paleosol was found on the continental shelf during a study of sea floor scour, nucleated by large artificial reef structures such as vessel hulks, barges, train cars, military vehicles, etc., called “scour nuclei”. It is a relic paleo-land surface of sapling-sized tree stumps, root systems, and fossil...
Mixed natal origins present management challenges for a non-native fish established throughout a modified river network
Michael K. Akland, Karin E. Limburg, Brian D. Healy, William E. Pine III
2025, Canadian Journal of Fisheries and Aquatic Sciences (82) 1-13
Expansion of non-native brown trout (Salmo trutta) in the Colorado River below Glen Canyon Dam motivated reevaluation of suppression strategies to minimize potential impacts to native fishes in the Grand Canyon, Arizona, USA. Brown trout are one of several non-native fish species of management concern in this river reach, and...
Fine-scale spatial risk models to predict avian collisions with power lines
James M. Pay, Elissa Z. Cameron, Clare E. Hawkins, Christopher Johnson, Amelia J. Koch, Jason M. Wiersma, Todd E. Katzner
2025, Journal of Applied Ecology (62) 1820-1830
1. Avian fatalities caused by collisions with overhead power lines are an important conservation issue worldwide. Although mitigation strategies can help reduce mortalities, given their considerable cost and the vast scale of power line infrastructure, cost-effective action requires that these efforts be prioritised to areas with the highest potential risk...
Considerations for using tag-returns to monitor targeted removal of invasive fishes
Jessica C. Stanton, Benjamin J. Marcek, Marybeth K. Brey
2025, North American Journal of Fisheries Management (45) 669-683
ObjectiveTargeted removals are used for management of some invasive fish populations. Tag–return studies are one approach that can be used to assess the efficacy of targeted removals. However, there are many decisions to make when designing a tag–return study. We used simulation modeling to outline general guidelines for consideration when...
Estimated hydrogeologic, spatial, and temporal distribution of self-supplied domestic groundwater withdrawals for aquifers of the Virginia Coastal Plain
Matthew R. Kearns, Jason P. Pope
2025, Scientific Investigations Report 2025-5051
Water use from private-domestic wells accounts for nearly 40 percent of total groundwater withdrawals in the Virginia Coastal Plain Physiographic Province (henceforth called the Virginia Coastal Plain). However, because self-supplied domestic water use generally falls below the Virginia Department of Environmental Quality (VDEQ) reporting and management threshold of 300,000 gallons...
Modeling daily ice cover in northern hemisphere lakes with a long short‐term memory neural network
Xinchen He, Konstantinos M. Andreadis, Allison H. Roy, Theodore Langhorst, Abhishek Kumar, Caitlyn S. Butler
2025, Geophysical Research Letters (52)
Quantifying lake ice loss is crucial for understanding the impact of climate change on lake ecosystems. In this study, we trained a deep learning model (Long-Short Term Memory with Landsat observations, 1984–2012) to simulate Northern Hemisphere lake ice changes at a fine spatial scale (> 0.1 km2) from 1980 to...
The impact of burial diagenesis on soil-formed minerals in paleosols using stable isotopes of phyllosilicates and carbonate clumped isotopes
Julia A. McIntosh, Neil J. Tabor, Isabel P. Montañez
2025, Chemical Geology (692)
To understand the effects of burial diagenesis on the stable isotope geochemistry of soil-formed clay and carbonate minerals in paleosols, samples were collected from seven cores, spanning middle- to upper-Pennsylvanian strata of the Illinois Basin, with varied maximum burial depths of 1–3 km. Mixed-layer illite-smectite and kaolinite mixtures give δ2H and...
Are equilibrium shoreline models just convolutions?
Sean Vitousek, Daniel D. Buscombe, Eduardo Gomez-de la Peña, Kit Calcraft, Mark A. Lundine, Kristen D. Splinter, Giovanni Coco, Patrick L. Barnard
2025, JGR Earth Surface (130)
Yes. Equilibrium shoreline models, which simulate wave-driven cross-shore erosion and accretion, are mathematically equivalent to a discrete convolution (i.e., a weighted, moving average) of a time series of wave-forcing conditions with a parameterized memory-decay kernel function. The direct equivalence between equilibrium shoreline models and convolutions reveals key theoretical aspects of...
Estimating daily public supply water use by drinking water service area in New Jersey
Jennifer L. Shourds, Malia H. Scott
2025, Scientific Investigations Report 2024-5061
This report, prepared in cooperation with the New Jersey Department of Environmental Protection, presents a method for estimating daily public supply water use by drinking water service area systems for New Jersey. The ability to accurately estimate daily public supply water use could help water supply planners in New Jersey...
The stratigraphic record of the mid-Piacenzian warm period on the Atlantic Coastal Plain
Harry J. Dowsett, Whittney Spivey
2025, Stratigraphy (22) 81-97
Anthropogenic climate change is an existential threat to our planet, impacting everything from the delicate balance of ecosystems to the availability of vital resources. Coastal regions, particularly vulnerable to the impacts of climate change due to rising sea levels and changing weather patterns, are experiencing increased erosion, flooding, and habitat...
Characterizing water-quality response after the 2020 Cameron Peak Fire using a novel application of the Weighted Regressions on Time, Discharge, and Season method
Manya Helene Ruckhaus, David W. Clow, Robert M. Hirsch, Tanner William Chapin
2025, Hydrological Processes (39)
The frequency and severity of wildfire activity in the western United States emphasises the utility of hydrologic models to predict water-quality response. This study presents a novel application of the Weighted Regressions on Time, Discharge and Season (WRTDS) method to assess potential changes in water quality in two watersheds draining...
