Landscape and flow metrics affecting the distribution of a federally-threatened fish: Improving management, model fit, and model transferability
Thomas A. Worthington, T. Zhang, Daniel R. Logue, Aaron R. Mittelstet, Shannon K. Brewer
2016, Ecological Modelling (342) 1-18
Truncated distributions of pelagophilic fishes have been observed across the Great Plains of North America, with water use and landscape fragmentation implicated as contributing factors. Developing conservation strategies for these species is hindered by the existence of multiple competing flow regime hypotheses related to species...
Magnetic and gravity gradiometry framework for Mesoproterozoic iron oxide-apatite and iron oxide-copper-gold deposits, southeast Missouri, USA
Anne E. McCafferty, Jeffrey Phillips, Rhonda L. Driscoll
2016, Economic Geology (111) 1882
High-resolution airborne magnetic and gravity gradiometry data provide the geophysical framework for evaluating the exploration potential of hidden iron oxide deposits in Mesoproterozoic basement rocks of southeast Missouri. The data are used to calculate mineral prospectivity for iron oxide-apatite (IOA) ± rare earth element (REE) and iron oxide-copper-gold (IOCG) deposits....
Constraining the relative importance of raindrop- and flow-driven sediment transport mechanisms in postwildfire environments and implications for recovery time scales
Luke McGuire, Jason W. Kean, Dennis M. Staley, Francis K. Rengers, Thad A. Wasklewicz
2016, Journal of Geophysical Research (121) 2211-2237
Mountain watersheds recently burned by wildfire often experience greater amounts of runoff and increased rates of sediment transport relative to similar unburned areas. Given the sedimentation and debris flow threats caused by increases in erosion, more work is needed to better understand the physical mechanisms responsible for the observed increase...
Transcriptome discovery in non-model wild fish species for the development of quantitative transcript abundance assays
Cassidy M. Hahn, Luke R. Iwanowicz, Robert S. Cornman, Patricia M. Mazik, Vicki S. Blazer
2016, Comparative Biochemistry and Physiology, Part D: Genomics and Proteomics (20) 27-40
Environmental studies increasingly identify the presence of both contaminants of emerging concern (CECs) and legacy contaminants in aquatic environments; however, the biological effects of these compounds on resident fishes remain largely unknown. High throughput methodologies were employed to establish partial transcriptomes for three wild-caught, non-model fish species; smallmouth bass (Micropterus...
Challenge to the model of lake charr evolution: Shallow- and deep-water morphs exist within a small postglacial lake
Louise Chavarie, Andrew M. Muir, Mara S. Zimmerman, Shauna M. Baillie, Michael J. Hansen, Nancy A. Nate, Daniel L. Yule, Trevor Middel, Paul Bentzen, Charles C. Krueger
2016, Biological Journal of the Linnean Society
All examples of lake charr (Salvelinus namaycush) diversity occur within the largest, deepest lakes of North America (i.e. > 2000 km2). We report here Rush Lake (1.3 km2) as the first example of a small lake with two lake charr morphs (lean and huronicus). Morphology, diet, life history, and genetics were examined to...
Grassland and cropland net ecosystem production of the U.S. Great Plains: Regression tree model development and comparative analysis
Bruce K. Wylie, Daniel Howard, Devendra Dahal, Tagir Gilmanov, Lei Ji, Li Zhang, Kelcy Smith
2016, Remote Sensing (8) 1-28
This paper presents the methodology and results of two ecological-based net ecosystem production (NEP) regression tree models capable of up scaling measurements made at various flux tower sites throughout the U.S. Great Plains. Separate grassland and cropland NEP regression tree models were trained using various remote sensing data and other...
Forecasting tidal marsh elevation and habitat change through fusion of Earth observations and a process model
Kristin B. Byrd, Lisamarie Windham-Myers, Thomas Leeuw, Bryan D. Downing, James T. Morris, Matthew C. Ferner
2016, Ecosphere (7)
Reducing uncertainty in data inputs at relevant spatial scales can improve tidal marsh forecasting models, and their usefulness in coastal climate change adaptation decisions. The Marsh Equilibrium Model (MEM), a one-dimensional mechanistic elevation model, incorporates feedbacks of organic and inorganic inputs to project elevations under sea-level rise scenarios. We tested...
Survival of translocated sharp-tailed grouse: Temporal threshold and age effects
Steven R. Mathews, Peter S. Coates, David J. Delehanty
2016, Wildlife Research (43) 220-227
Context: The Columbian sharp-tailed grouse (Tympanuchus phasianellus columbianus) is a subspecies of conservation concern in the western United States, currently occupying ≤10% of its historic range. Land and management agencies are employing translocation techniques to restore Columbian sharp-tailed grouse (CSTG) populations. However, establishing self-sustaining populations by translocating grouse often is...
Spatial and temporal variation of stream chemistry associated with contrasting geology and land-use patterns in the Chesapeake Bay watershed—Summary of results from Smith Creek, Virginia; Upper Chester River, Maryland; Conewago Creek, Pennsylvania; and Difficult Run, Virginia, 2010–2013
Kenneth E. Hyer, Judith M. Denver, Michael J. Langland, James S. Webber, J. K. Böhlke, W. Dean Hively, John W. Clune
2016, Scientific Investigations Report 2016-5093
Despite widespread and ongoing implementation of conservation practices throughout the Chesapeake Bay watershed, water quality continues to be degraded by excess sediment and nutrient inputs. While the Chesapeake Bay Program has developed and maintains a large-scale and long-term monitoring network to detect improvements in water quality throughout the watershed, fewer...
Flood-inundation maps for the Yellow River at Plymouth, Indiana
Chad D. Menke, Aubrey R. Bunch, Moon H. Kim
2016, Scientific Investigations Report 2016-5117
Digital flood-inundation maps for a 4.9-mile reach of the Yellow River at Plymouth, Indiana (Ind.), were created by the U.S. Geological Survey (USGS) in cooperation with the Indiana Office of Community and Rural Affairs. The flood-inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site...
Conductivity response to intraplate deformation: Evidence for metamorphic devolatilization and crustal‐scale fluid focusing
Stephan Thiel, Paul Soeffky, Lars Krieger, Klaus Regenauer-Lieb, Jared R. Peacock, Graham Heinson
2016, Geophysical Research Letters (43) 11,236-11,244
We present two‐dimensional electrical resistivity models of two 40 km magnetotelluric (MT) profiles across the Frome Embayment to the east of the northern Flinders Ranges, South Australia. The lower crust shows low resistivity of 10 Ω m at around 30 km depth. The middle crust is dominated by resistive (>1000 Ω m) basement rocks underlying the...
Probability of acoustic transmitter detections by receiver lines in Lake Huron: results of multi-year field tests and simulations
Todd A. Hayden, Christopher M. Holbrook, Thomas Binder, John M. Dettmers, Steven J. Cooke, Christopher S. Vandergoot, Charles C. Krueger
2016, Animal Biotelemetry (4) 1-14
BackgroundAdvances in acoustic telemetry technology have led to an improved understanding of the spatial ecology of many freshwater and marine fish species. Understanding the performance of acoustic receivers is necessary to distinguish between tagged fish that may have been present but not detected and from...
Patterns of diel variation in nitrate concentrations in the Potomac River
Douglas A. Burns, Matthew P. Miller, Brian A. Pellerin, Paul D. Capel
2016, Freshwater Science (35) 1117-1132
The Potomac River is a large source of N to Chesapeake Bay, where reducing nutrient loads is a focus of efforts to improve trophic status. Better understanding of NO3– loss, reflected in part by diel variation in NO3– concentrations, may refine model predictions of N loads to the Bay. We...
Bioenergy production and forest landscape change in the southeastern United States
Jennifer K. Costanza, Robert C. Abt, Alexa McKerrow, Jaime A. Collazo
2016, GCB Bioenergy (9) 924-939
Production of woody biomass for bioenergy, whether wood pellets or liquid biofuels, has the potential to cause substantial landscape change and concomitant effects on forest ecosystems, but the landscape effects of alternative production scenarios have not been fully assessed. We simulated landscape change from 2010 to 2050 under five scenarios...
Interannual water-level fluctuations and the vegetation of prairie potholes: Potential impacts of climate change
Arnold van der Valk, David M. Mushet
2016, Wetlands (36) 397-406
Mean water depth and range of interannual water-level fluctuations over wet-dry cycles in precipitation are major drivers of vegetation zone formation in North American prairie potholes. We used harmonic hydrological models, which require only mean interannual water depth and amplitude of water-level fluctuations over a wet–dry cycle, to examine how...
Quantifying seepage using heat as a tracer in selected irrigation canals, Walker River Basin, Nevada, 2012 and 2013
Ramon C. Naranjo, David W. Smith
2016, Scientific Investigations Report 2016-5133
The Walker River is an important source of water for western Nevada. The river provides water for agriculture and recharge to local aquifers used by several communities. Farmers began diverting water from the Walker River in the 1860s to support growing agricultural development. Over time, the reduced inflows into...
Tradeoffs between physical captures and PIT tag antenna array detections: A case study for the Lower Colorado River Basin population of humpback chub (Gila cypha)
Kristen Nicole Pearson, William L. Kendall, Dana L. Winkelman, William R. Persons
2016, Fisheries Research (183) 263-274
A key component of many monitoring programs for special status species involves capture and handling of individuals as part of capture-recapture efforts for tracking population health and demography. Minimizing negative impacts from sampling, such as through reduced handling, aids prevention of negative impacts on species from monitoring efforts. Using simulation...
A rare moderate‐sized (Mw 4.9) earthquake in Kansas: Rupture process of the Milan, Kansas, earthquake of 12 November 2014 and its relationship to fluid injection
George Choy, Justin L. Rubinstein, William L. Yeck, Daniel E. McNamara, Charles Mueller, Oliver S. Boyd
2016, Seismological Research Letters (87) 1433-1441
The largest recorded earthquake in Kansas occurred northeast of Milan on 12 November 2014 (Mw 4.9) in a region previously devoid of significant seismic activity. Applying multistation processing to data from local stations, we are able to detail the rupture process and rupture geometry of the mainshock, identify the causative fault...
River rating complexity
Robert R. Holmes Jr.
2016, Conference Paper, River flow 2016
Accuracy of streamflow data depends on the veracity of the rating model used to derive a continuous time series of discharge from the surrogate variables that can readily be collected autonomously at a streamgage. Ratings are typically represented as a simple monotonic increasing function (simple rating), meaning the discharge is...
Forecasting inundation from debris flows that grow during travel, with application to the Oregon Coast Range, USA
Mark E. Reid, Jeffrey A. Coe, Dianne Brien
2016, Geomorphology (273) 396-411
Many debris flows increase in volume as they travel downstream, enhancing their mobility and hazard. Volumetric growth can result from diverse physical processes, such as channel sediment entrainment, stream bank collapse, adjacent landsliding, hillslope erosion and rilling, and coalescence of multiple debris flows; incorporating these varied phenomena into physics-based debris-flow...
Using structural equation modeling to link human activities to wetland ecological integrity
E. William Schweiger, James B. Grace, David Cooper, Ben Bobowski, Mike Britten
2016, Ecosphere (7) 1-30
The integrity of wetlands is of global concern. A common approach to evaluating ecological integrity involves bioassessment procedures that quantify the degree to which communities deviate from historical norms. While helpful, bioassessment provides little information about how altered conditions connect to community response. More detailed information is needed for conservation...
An optimal sample data usage strategy to minimize overfitting and underfitting effects in regression tree models based on remotely-sensed data
Yingxin Gu, Bruce K. Wylie, Stephen P. Boyte, Joshua J. Picotte, Danny Howard, Kelcy Smith, Kurtis Nelson
2016, Remote Sensing (8) 1-13
Regression tree models have been widely used for remote sensing-based ecosystem mapping. Improper use of the sample data (model training and testing data) may cause overfitting and underfitting effects in the model. The goal of this study is to develop an optimal sampling data usage strategy for any dataset and...
Sensitivity of the projected hydroclimatic environment of the Delaware River basin to formulation of potential evapotranspiration
Tanja N. Williamson, Elizabeth A. Nystrom, Paul C.D. Milly
2016, Climatic Change (139) 215-228
The Delaware River Basin (DRB) encompasses approximately 0.4 % of the area of the United States (U.S.), but supplies water to 5 % of the population. We studied three forested tributaries to quantify the potential climate-driven change in hydrologic budget for two 25-year time periods centered on 2030 and 2060, focusing on...
Smartphone-based distributed data collection enables rapid assessment of shorebird habitat suitability
E. Robert Thieler, Sara L. Zeigler, Luke Winslow, Megan Hines, Jordan S. Read, Jordan I. Walker
2016, PLoS ONE (11)
Understanding and managing dynamic coastal landscapes for beach-dependent species requires biological and geological data across the range of relevant environments and habitats. It is difficult to acquire such information; data often have limited focus due to resource constraints, are collected by non-specialists, or lack observational uniformity. We developed an open-source...
Competitive exclusion over broad spatial extents is a slow process: Evidence and implications for species distribution modeling
Charles B. Yackulic
2016, Ecography (40) 305-313
There is considerable debate about the role of competition in shaping species distributions over broad spatial extents. This debate has practical implications because predicting changes in species' geographic ranges in response to ongoing environmental change would be simpler if competition could be ignored. While this debate has been the subject...