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Publication Extents

Not all publications have extents, not all extents are completely accurate
Capture efficiency and injury rates of band-tailed pigeons using whoosh nets
Christopher L. Coxen, Daniel P. Collins, Scott A. Carleton
2018, Wilson Journal of Ornithology (130) 321-326
Catching ground feeding birds has typically been accomplished through small, walk-in funnel-style traps. This approach is limited because it requires a bird to find its way into the trap, is biased toward less wary birds, and does not allow targeted trapping of individual birds. As part of a large study...
Use of non-invasive genetics to generate core-area population estimates of a threatened predator in the Superior National Forest, USA
Shannon Barber-Meyer, Daniel Ryan, David Grosshuesch, Timothy Catton, Sarah Malick-Wahls
2018, Canadian Wildlife Biology and Management (7) 46-55
Canada lynx (Lynx canadensis) are found in boreal forests of Canada and Alaska and range southward into the contiguous United States. Much less is understood about lynx in their southern range compared to northern populations. Because lynx are currently listed as threatened under the US Endangered Species Act but have...
Methods for peak-flow frequency analysis and reporting for streamgages in or near Montana based on data through water year 2015
Steven K. Sando, Peter M. McCarthy
2018, Scientific Investigations Report 2018-5046
This report documents the methods for peak-flow frequency (hereinafter “frequency”) analysis and reporting for streamgages in and near Montana following implementation of the Bulletin 17C guidelines. The methods are used to provide estimates of peak-flow quantiles for 50-, 42.9-, 20-, 10-, 4-, 2-, 1-, 0.5-, and 0.2-percent annual exceedance probabilities...
Incorporating road crossing data into vehicle collision risk models for moose (Alces americanus) in Massachusetts, USA
Katherine Zeller, David Wattles, Stephen Destefano
2018, Environmental Management (62) 518-528
Wildlife–vehicle collisions are a human safety issue and may negatively impact wildlife populations. Most wildlife–vehicle collision studies predict high-risk road segments using only collision data. However, these data lack biologically relevant information such as wildlife population densities and successful road-crossing locations. We overcome this shortcoming with a new method that...
Use of imaging spectroscopy and LIDAR to characterize fuels for fire behavior prediction
E. Natasha Stavros, Janice Coen, Birgit Peterson, Harshvardhan Singh, Kama Kennedy, Carlos Ramirez, David Schimel
2018, Remote Sensing Applications: Society and Environment (11) 41-50
To protect ecosystem services and the increasing wildland urban interface in a world with fire, comprehensive maps of wildland fuels are needed to predict fire behavior and effects. Traditionally, fuels have been categorized into a classification scheme whereby a single metric represents vegetation composition and structure, which can then be parameterized based...
Modeled inundation limits of potential lahars from Mount Adams in the White Salmon River Valley, Washington
Julia P. Griswold, Thomas C. Pierson, Joseph A. Bard
2018, Open-File Report 2018-1013
Lahars large enough to reach populated areas are a hazard at Mount Adams, a massive volcano in the southern Cascade Range of Washington State (fig. 1). It is considered to be still active and has the potential to erupt again. By definition, lahars are gravity-driven flows of water-saturated mixtures of...
Ecosystems science: Genes to landscapes
U.S. Geological Survey
2018, Fact Sheet 2018-3030
Bountiful fisheries, healthy and resilient wildlife, flourishing forests and vibrant grasslands are coveted resources that benefit all Americans. U.S. Geological Survey (USGS) science supports the conservation and management of the Nation’s fish and wildlife, and the landscapes they inhabit. Our biological resources—ecosystems and the wild things that live in them—are...
Ecological genomics predicts climate vulnerability in an endangered southwestern songbird
Kristin Ruegg, Rachael A. Bay, Eric C. Anderson, James F. Saracco, Ryan J. Harrigan, Mary J. Whitfield, Eben H. Paxton, Thomas B. Smith
2018, Ecology Letters (21) 1085-1096
Few regions have been more severely impacted by climate change in the USA than the Desert Southwest. Here, we use ecological genomics to assess the potential for adaptation to rising global temperatures in a widespread songbird, the willow flycatcher (Empidonax traillii), and find the endangered desert southwestern subspecies (E. t....
Compilation and analysis of multiple groundwater-quality datasets for Idaho
Stephen A. Hundt, Candice B. Hopkins
2018, Open-File Report 2018-1079
Groundwater is an important source of drinking and irrigation water throughout Idaho, and groundwater quality is monitored by various Federal, State, and local agencies. The historical, multi-agency records of groundwater quality include a valuable dataset that has yet to be compiled or analyzed on a statewide level. The purpose...
Lahar—River of volcanic mud and debris
Jon J. Major, Thomas C. Pierson, James W. Vallance
2018, Fact Sheet 2018-3024
Lahar, an Indonesian word for volcanic mudflow, is a mixture of water, mud, and volcanic rock flowing swiftly along a channel draining a volcano. Lahars can form during or after eruptions, or even during periods of inactivity. They are among the greatest threats volcanoes pose to people and property. Lahars...
Rethinking the use of seabed sediment temperature profiles to trace submarine groundwater flow
Barret L. Kurylyk, Dylan J. Irvine, A.A. Mohammed, V. F. Bense, Martin A. Briggs, J.W. Loder, Y. Geshelin
2018, Water Resources Research (54) 4595-4614
Submarine groundwater fluxes across the seafloor facilitate important hydrological and biogeochemical exchanges between oceans and seabed sediment, yet few studies have investigated spatially distributed groundwater fluxes in deep‐ocean environments such as continental slopes. Heat has been previously applied as a submarine groundwater tracer using an analytical solution to a heat...
Acquisition and dissemination of cephalosporin-resistant E. coli in migratory birds sampled at an Alaska landfill as inferred through genomic analysis
Christina Ann Ahlstrom, Jonas Bonnedahl, Hanna Woksepp, Jorge Hernandez, Olsen Bjorn, Andrew M. Ramey
2018, Scientific Reports (8)
Antimicrobial resistance (AMR) in bacterial pathogens threatens global health, though the spread of AMR bacteria and AMR genes between humans, animals, and the environment is still largely unknown. Here, we investigated the role of wild birds in the epidemiology of AMR Escherichia coli. Using next-generation sequencing, we characterized cephalosporin-resistant E....
Downstream impacts of dams: shifts in benthic invertivorous fish assemblages
Rafaela Vendrametto Granzotti, Leandro E. Miranda, Angelo A. Agostinho, Luiz Carlos Gomes
2018, Aquatic Sciences (80) 1-14
Impoundments alter connectivity, sediment transport and water discharge in rivers and floodplains, affecting recruitment, habitat and resource availability for fish including benthic invertivorous fish, which represent an important link between primary producers and higher trophic levels in tropical aquatic ecosystems. We investigated long-term changes to water regime, water quality, and...
Strategies for effective collaborative manuscript development in interdisciplinary science teams
Samantha K. Oliver, C. Emi Fergus, Nicholas K. Skaff, Tyler Wagner, Pang-Ning Tan, Kendra Spence Cheruvelil, Patricia A. Soranno
2018, Ecosphere (9) 1-13
Science is increasingly being conducted in large, interdisciplinary teams. As team size increases, challenges can arise during manuscript development, where achieving one team goal (e.g., inclusivity) may be in direct conflict with other goals (e.g., efficiency). Here, we present strategies for effective collaborative manuscript development that draw from our experiences...
Application of microtremor horizontal-to-vertical spectral ratio (MHVSR) analysis for site characterization: State of the art
S. Molnar, J. F. Cassidy, S. Castellaro, C. Cornou, H. Crow, J. A. Hunter, S. Matsushima, F. J. Sanchez-Sesma, Alan Yong
2018, Surveys in Geophysics
Nakamura (Q Rep Railway Tech Res Inst 30:25–33, 1989) popularized the application of the horizontal-to-vertical spectral ratio (HVSR) analysis of microtremor (seismic noise or ambient vibration) recordings to estimate the predominant frequency and amplification factor of earthquake shaking. During the following quarter century, popularity in the microtremor HVSR (MHVSR) method...
Leaf to landscape responses of giant sequoia to hotter drought: An introduction and synthesis for the special section
Koren R. Nydick, Nathan L. Stephenson, Anthony R. Ambrose, Gregory P. Asner, Wendy L. Baxter, Adrian J. Das, Todd E. Dawson, Roberta E. Martin, Tarin Paz-Kagan
2018, Forest Ecology and Management (419-420) 249-256
Hotter droughts are becoming more common as climate change progresses, and they may already have caused instances of forest dieback on all forested continents. Learning from hotter droughts, including where on the landscape forests are more or less vulnerable to these events, is critical to help resource managers proactively prepare...
A snow density dataset for improving surface boundary conditions in Greenland ice sheet firn modeling
Robert Fausto, Jason E. Box, Baptiste Vandecrux, Dirk van As, Konrad Steffen, Michael J. MacFerrin, Horst Machguth, William Colgan, Daniel Mcgrath, Lora S. Koenig, Charalampos Charalampidis, Roger J. Braithwaite
2018, Frontiers in Earth Science (6)
The surface snow density of glaciers and ice sheets is of fundamental importance in converting volume to mass in both altimetry and surface mass balance studies, yet it is often poorly constrained. Site-specific surface snow densities are typically derived from empirical relations based on temperature and wind speed. These parameterizations...
Integrating adaptive management and ecosystem services concepts to improve natural resource management: Challenges and opportunities
Rebecca S. Epanchin-Niell, James W. Boyd, Molly K. Macauley, Lynn Scarlett, Carl D. Shapiro, Byron K. Williams
2018, Circular 1439
Executive Summary—OverviewNatural resource managers must make decisions that affect broad-scale ecosystem processes involving large spatial areas, complex biophysical interactions, numerous competing stakeholder interests, and highly uncertain outcomes. Natural and social science information and analyses are widely recognized as important for informing effective management. Chief among the systematic approaches for improving...
Separable correlation and maximum likelihood
Karl Oskar Ekvall, Brian R. Gray
2018, arXiv
We consider estimation of the covariance matrix of a multivariate normal distribution when the correlation matrix is separable in the sense that it factors as a Kronecker product of two smaller matrices. A computationally convenient coordinate descent-type algorithm is developed for maximum likelihood estimation. Simulations indicate our method often gives...
Response to comment by Walker et al. on “From data to decisions: Processing information, biases, and beliefs for improved management of natural resources and environments”
Pierre D. Glynn, Alexey A. Voinov, Carl D. Shapiro, Paul A. White
2018, Earth's Future (6) 762-769
Our different kinds of minds and types of thinking affect the ways we decide, take action, and cooperate (or not). The comment by Walker et al. (2018, https://doi.org/10.1002/2017EF000750) illustrates several points made by Glynn et al. (2017, https://doi.org/10.1002/2016EF000487) and many other articles. Namely, biases and beliefs...
Modeling the fish community population dynamics and forecasting the eradication success of an exotic fish from an alpine stream
Christophe Laplanche, Arnaud Elger, Frederic Santoul, Gary P. Thiede, Phaedra Budy
2018, Biological Conservation (223) 34-46
Management actions aimed at eradicating exotic fish species from riverine ecosystems can be better informed by forecasting abilities of mechanistic models. We illustrate this point with an example of the Logan River, Utah, originally populated with endemic cutthroat trout (Oncorhynchus clarkii utah), which compete with...
Hydrologic and water-quality characteristics of Caño Boquerón, Cabo Rojo, and Puerto Mosquito, Isla de Vieques, Puerto Rico, July 2015–July 2016
Julieta M. Gómez-Fragoso, Jose A. Santiago-Saez
2018, Scientific Investigations Report 2018-5018
Coastal lagoons are common features of the Puerto Rico shoreline that provide habitat for commercial and recreational species and serve important roles in the nutrient cycle of the ecosystems. The U.S. Geological Survey, in cooperation with the Puerto Rico Environmental Quality Board, conducted a limnological study at Caño Boquerón in...
Crustal structure and quaternary acceleration of deformation rates in central Washington revealed by stream profile inversion, potential field geophysics, and structural geology of the Yakima folds
Lydia M. Staisch, Richard J. Blakely, Harvey Kelsey, Richard Styron, Brian Sherrod
2018, Tectonics (37) 1750-1770
Post‐Miocene tectonic uplift along fault‐cored anticlines within central Washington produced the Yakima Fold Province, a region of active NNE‐SSW shortening in the Cascadian backarc. The relative timing and rate of deformation along individual structures is coarsely defined yet imperative for seismic hazard assessment. In this work, we use geomorphic and...
Hydrogeologic setting, conceptual groundwater flow system, and hydrologic conditions 1995–2010 in Florida and parts of Georgia, Alabama, and South Carolina
Jason C. Bellino, Eve L. Kuniansky, Andrew M. O'Reilly, Joann F. Dixon
2018, Scientific Investigations Report 2018-5030
The hydrogeologic setting and groundwater flow system in Florida and parts of Georgia, Alabama, and South Carolina is dominated by the highly transmissive Floridan aquifer system. This principal aquifer is a vital source of freshwater for public and domestic supply, as well as for industrial and agricultural uses throughout the...