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Image-based methods have compelling, demonstrated potential for characterizing flow fields in rivers, but algorithms like particle image velocimetry (PIV) must be further tested and improved to enable more effective use of these techniques. This paper presents a framework designed for this exact purpose: Simulating Hydraulics and Images for Velocimetry Evaluation...

River ecosystems rely on varied flows, including regular floods, to provide food and habitat for aquatic organisms. However, flows of freshwater are becoming increasingly managed for irrigation, industry, and other human activities, and the frequency of floods is changing. Our study used time-series data of photosynthesis from 143 rivers across...

Two independent machine learning techniques, boosted regression trees and artificial neural networks, were used to examine the physicochemical and meteorological variables that affect the seasonal growth and decline of harmful algal blooms (HABs) in a shallow, hypereutrophic lake in southern Oregon. High temporal resolution data collected...

Monitoring trends in large mammal populations is a fundamental component of wildlife management and conservation. However, direct estimates of population size and vital rates of large mammals can be logistically challenging and expensive. Indicators that reflect trends in abundance, therefore, can be valuable tools for...

Multistressor studies were performed in five regions of the United States to assess the role of pesticides as stressors affecting invertebrate communities in wadable streams. Pesticides and other chemical and physical stressors were measured in 75 to 99 streams per region for 4 weeks, after...

Desert spring systems of the American southwest hold high local fish endemism and are ranked among the most threatened ecosystems in the world. The prioritization of conservation resources to protect species living within these arid landscapes requires knowledge of species abundance and distribution. The...

BackgroundImproved understanding of wildlife population connectivity among protected area networks can support effective planning for the persistence of wildlife populations in the face of land use and climate change. Common approaches to estimating connectivity often rely on small samples of individuals without considering the spatial structure of populations,...

Sicklefin (Macrhybopsis meeki) and sturgeon chub (M. gelida) historically occurred throughout the Missouri River (MR), in some tributaries, and Mississippi River downstream of the MR. They have been species of U.S. state-level conservation concern and U.S. Endangered Species Act listing candidates since the 1990s. We applied analytical...

Biodiversity is threatened due to land-use change, overexploitation, pollution, and anthropogenic climate change, altering ecosystem functioning around the globe. Protecting areas rich in biodiversity is often difficult without fully understanding and mapping species’ ecological niche requirements. As a result, the umbrella species concept is often applied, whereby conservation of...

In 2018, Costa Rica demonstrated its commitment to the Paris Agreement and published its Decarbonization Plan for achieving zero net emissions by the year 2050. We evaluate the impacts of the country's strategy for decarbonizing its Agriculture, Forestry and Other Land Uses (AFOLU) sectors by coupling the Integrated Economic-Environmental Modeling...

Marsh environments, characterized by their flora and fauna, change laterally in response to shoreline erosion, water levels and inundation, and anthropogenic activities. The Grand Bay coastal system (USA) has undergone multiple large-scale geomorphic and hydrologic changes resulting in altered sediment supply, depositional patterns, and degraded barrier...

Climate warming is expected to increase global methane (CH4) emissions from wetland ecosystems. Although in situ eddy covariance (EC) measurements at ecosystem scales can potentially detect CH4 flux changes, most EC systems have only a few years of data collected, so temporal trends in CH4 remain uncertain. Here, we use established drivers to...

Rabbit hemorrhagic disease virus 2 (RHDV2), recently detected in the western United States, has the potential to cause mass mortality events in wild rabbit and hare populations. Currently, few management strategies exist other than vaccination. We developed a spatially explicit model of RHDV2 for...

The Puget Sound Coastal Storm Modeling System (PS-CoSMoS) is a tool designed to dynamically downscale future climate scenarios (i.e., projected changes in wind and pressure fields and temperature) to compute regional water levels, waves, and compound flooding over large geographic areas (100 s of kilometers) at high spatial resolutions (1...

Plasmodium parasites infect thousands of species and provide an exceptional system for studying host-pathogen dynamics, especially for multi-host pathogens. However, understanding these interactions requires an accurate assay of infection. Assessing Plasmodium infections using microscopy on blood smears often misses infections with low parasitemias (the fractions of cells infected), and biases in malaria prevalence...

Freshwater salinization is a growing global concern impacting human and ecosystem needs with impacts to water availability for human and ecological uses. In the Upper Colorado River Basin (UCRB), dissolved solids in streams compound ongoing water supply challenges to further limit water availability and cause economic damages....

The U.S. Geological Survey, in cooperation with the Confederated Tribes of the Umatilla Indian Reservation (CTUIR), (1) estimated water-level change from a multiple-well aquifer test centered on CTUIR well number 422 and (2) evaluated hydraulic connections between the pumping and observation wells on the Umatilla Indian Reservation near Mission, northeastern...

Silicic magma reservoirs are responsible for producing the largest explosive eruptions in the geologic record. Petrologic and geochronological data provide evidence for these systems spending substantial periods of time (104–105 yrs) within the upper crust prior to eruption; however, the long-term thermochemical evolution of these systems is...

Ecosystem processes in rivers are thought to be controlled more by extrinsic than intrinsic factors, that is, the result of processes that occur upstream or within their watersheds. However, large floodplain rivers have a diverse assemblage of aquatic areas spanning gradients of connectivity with the main...

The 1 September 1886 Charleston, South Carolina, earthquake was one of the largest preinstrumental earthquakes in eastern North America for which extensive contemporaneous observations were documented. The distribution of shaking was mapped shortly after the earthquake, and reconsidered by several authors in the late twentieth century, but has not been...

Tropical forests play a critical role in the global carbon (C) cycle. These ecosystems maintain the highest rates of net primary production (NPP) on Earth (Hengl et al., 2017), contain c. 30% of terrestrial C stocks (Jobbagy & Jackson, 2000), and have some...

Executive SummarySurvival of out-migrating juvenile salmonids (Oncorhynchus spp.) through the Sacramento-San Joaquin River Delta averages less than 33 percent, depending on water flow through the delta, and is partially governed by the distribution of fish among three Sacramento River distributaries: Sutter, Steamboat, and Georgiana sloughs. Behavioral altering structures in the...

Executive SummaryThe Bureau of Reclamation (Reclamation) operates the Central Valley Project (CVP), one of the nation’s largest water projects. Reclamation has an ongoing need to improve the scientific basis for adaptive management of the CVP and, by extension, joint operations with California’s State Water Project. The U.S. Geological Survey (USGS)...

Lake trophic state is a key ecosystem property that integrates a lake’s physical, chemical, and biological processes. Despite the importance of trophic state as a gauge of lake water quality, standardized and machine-readable observations are uncommon. Remote sensing presents an opportunity to detect and analyze lake...

Explosive volcanic eruptions produce vast quantities of silicate ash, whose surfaces are subsequently altered during atmospheric transit. These altered surfaces mediate environmental interactions, including atmospheric ice nucleation, and toxic effects in biota. A lack of knowledge of the initial, pre-altered ash surface has required previous studies to assume that the...