Rainbow trout movement behavior and habitat occupancy are influenced by sex and Pacific salmon presence in an Alaska river system
Kevin M. Fraley, Jeffrey A. Falke, Megan V. McPhee, Anupma Prakash
2018, Canadian Journal of Fisheries and Aquatic Sciences (75) 525-537
We used spatially continuous field-measured and remotely-sensed aquatic habitat characteristics paired with weekly ground-based telemetry tracking and snorkel surveys to describe movements and habitat occupancy of adult rainbow trout (N = 82) in a runoff-fed, salmon-influenced southcentral Alaska river system. We found that during the ice-free feeding season (June through...
Development of a dual luciferase activity and fluorescamine protein assay adapted to a 384 micro-well plate format: Reducing variability in human luciferase transactivation cell lines aimed at endocrine active substances
Jennifer Brennan, Donald E. Tillitt
2018, Toxicology in Vitro (47) 18-25
There is a need to adapt cell bioassays to 384-well and 1536-well formats instead of the traditional 96-well format as high-throughput screening (HTS) demands increase. However, the sensitivity and performance of the bioassay must be re-verified in these higher micro-well plates, and verification of cell health must also be HT...
Fish Bioenergetics 4.0: An R-based modeling application
David Deslauriers, Steven R. Chipps, James E. Breck, James A. Rice, Charles P. Madenjian
2018, Fisheries Magazine (42) 586-596
Bioenergetics modeling is a widely used tool in fisheries management and research. Although popular, currently available software (i.e., Fish Bioenergetics 3.0) has not been updated in over 20 years and is incompatible with newer operating systems (i.e., 64‐bit). Moreover, since the release of Fish Bioenergetics 3.0 in 1997, the number...
Evaluating trade-offs in bull trout reintroduction strategies using structured decision making
William R. Brignon, James T. Peterson, Jason B. Dunham, Howard A. Schaller, Carl B. Schreck
2018, Canadian Journal of Fisheries and Aquatic Sciences (75) 293-307
Structured decision making allows reintroduction decisions to be made despite uncertainty by linking reintroduction goals with alternative management actions through predictive models of ecological processes. We developed a decision model to evaluate the trade-offs between six bull trout (Salvelinus confluentus) reintroduction decisions with the goal of maximizing the number of...
Bipartite networks improve understanding of effects of waterbody size and angling method on angler–fish interactions
Christopher J. Chizinski, Dustin R. Martin, Daizaburo Shizuka, Kevin L. Pope
2018, Canadian Journal of Fisheries and Aquatic Sciences (75) 72-81
Networks used to study interactions could provide insights to fisheries. We compiled data from 27 297 interviews of anglers across waterbodies that ranged in size from 1 to 12 113 ha. Catch rates of fish species among anglers grouped by species targeted generally differed between angling methods (bank or boat). We constructed...
Fuel-reduction management alters plant composition, carbon and nitrogen pools, and soil thaw in Alaskan boreal forest
April M. Melvin, Gerardo Celis, Jill F. Johnstone, A. David McGuire, Helene Genet, Edward A.G. Schuur, T. Scott Rupp, Michelle C. Mack
2018, Ecological Applications (28) 149-161
Increasing wildfire activity in Alaska's boreal forests has led to greater fuel-reduction management. Management has been implemented to reduce wildfire spread, but the ecological impacts of these practices are poorly known. We quantified the effects of hand-thinning and shearblading on above- and belowground stand characteristics, plant species composition, carbon (C)...
The effectiveness of surrogate taxa to conserve freshwater biodiversity
David R. Stewart, Zachary E. Underwood, Frank J. Rahel, Annika W. Walters
2018, Conservation Biology (32) 183-194
Establishing protected areas has long been an effective conservation strategy, and is often based on more readily surveyed species. The potential of any freshwater taxa to be a surrogate of other aquatic groups has not been fully explored. We compiled occurrence data on 72 species of freshwater fish, amphibians, mussels,...
Using genetic and phenotypic comparisons to evaluate apparent segregation among Kokanee spawning groups
Steven L. Whitlock, Matthew R. Campbell, Michael C. Quist, Andrew M. Dux
2018, Transactions of the American Fisheries Society (147) 43-60
Genetic and phenotypic traits of spatially and temporally segregated kokanee Oncorhynchus nerka spawning groups in Lake Pend Oreille, Idaho, were compared to test for evidence of divergence on the basis of ecotype (stream spawners versus shoreline spawners) and spawn timing and to describe morphological, life history, and reproductive variation within and among...
Wanted dead or alive: A state-space mark-recapture-recovery model incorporating multiple recovery types and state uncertainty
Nathan J. Hostetter, Beth Gardner, Allen F. Evans, Bradley M. Cramer, Quinn Payton, Ken Collis, Daniel D. Roby
2018, Canadian Journal of Fisheries and Aquatic Sciences (75) 1117-1127
We developed a state-space mark-recapture-recovery model that incorporates multiple recovery types and state uncertainty to estimate survival of an anadromous fish species. We apply the model to a dataset of out-migrating juvenile steelhead trout (Oncorhynchus mykiss) tagged with passive integrated transponders, recaptured during outmigration, and recovered on bird colonies in...
Trophic pathways supporting Arctic grayling in a small stream on the Arctic Coastal Plain, Alaska
Jason J. McFarland, Mark S. Wipfli, Matthew S. Whitman
2018, Ecology of Freshwater Fish (27) 184-197
Beaded streams are prominent across the Arctic Coastal Plain (ACP) of Alaska, yet prey flow and food web dynamics supporting fish inhabiting these streams are poorly understood. Arctic grayling (Thymallus arcticus) are a widely distributed upper-level consumer on the ACP and migrate into beaded streams to forage during the short...
The first hop: Use of Beaufort Sea deltas by hatch-year semipalmated sandpipers
Roy T. Churchwell, Steve J. Kendall, Stephen C. Brown, Arny L. Blanchard, Tuula E. Hollmen, Abby Powell
2018, Estuaries and Coasts (41) 280-292
River deltas along Alaska’s Beaufort Sea coast are used by hatch-year semipalmated sandpipers (Calidris pusilla) after leaving their terrestrial natal sites, but the drivers of their use of these stopover sites on the first “hop” of fall migration are unknown. We quantified sandpiper temporal distribution and abundance as...
Origins of lead in populations of raptors
Todd E. Katzner, M J Stuber, V A Slabe, J T Anderson, J L Cooper, L L Rhea, B A Milsap
2018, Animal Conservation (21) 232-240
Although poisoning from anthropogenically derived lead threatens wildlife of many species, routes of lead exposure are unclear and rarely empirically tested. We used blood lead concentration and isotope ratio (207Pb/206Pb) data from populations of four species of raptors from across North America to test hypotheses associated with lead exposure via...
Linking spring phenology with mechanistic models of host movement to predict disease transmission risk
Jerod Merkle, Paul C. Cross, Brandon M. Scurlock, Eric K. Cole, Alyson B. Courtemanch, Sarah Dewey, Matthew J. Kauffman
2018, Journal of Applied Ecology (55) 810-819
Disease models typically focus on temporal dynamics of infection, while often neglecting environmental processes that determine host movement. In many systems, however, temporal disease dynamics may be slow compared to the scale at which environmental conditions alter host space-use and accelerate disease transmission.Using a mechanistic movement modelling...
Quantifying changes and influences on mottled duck density in Texas
Beth Ross, David A. Haukos, Patrick Walther
2018, Journal of Wildlife Management (82) 374-382
Understanding the relative influence of environmental and intrinsic effects on populations is important for managing and conserving harvested species, especially those species inhabiting changing environments. Additionally, climate change can increase the uncertainty associated with management of species in these changing environments, making understanding factors affecting their populations even more important....
Comparison of genetic and visual identification of cisco and lake whitefish larvae from Chaumont Bay, Lake Ontario
Ellen M. George, Matthew P. Hare, Darran L. Crabtree, Brian F. Lantry, Lars G. Rudstam
2018, Canadian Journal of Fisheries and Aquatic Sciences (75) 1329-1336
Cisco Coregonus artedi are an important component of native food webs in the Great Lakes, and their restoration is instrumental to the recovery of lake trout Salvelinus namaycush and Atlantic salmon Salmo salar. Difficulties with visual identification of larvae can confound early life history surveys, as cisco are often difficult...
Are shovelnose sturgeon a valid diet surrogate for endangered pallid sturgeon during the first year of life?
N.J.C. Gosch, A. P. Civiello, T. R. Gemeinhardt, J. L. Bonneau, James M. Long
2018, Journal of Applied Ichthyology (34) 39-41
No abstract available....
High-precision 41K/39K measurements by MC-ICP-MS indicate terrestrial variability of δ41K
Leah E. Morgan, Danielle P. Santiago Ramos, Brett Davidheiser-Kroll, John Faithfull, Nicholas S. Lloyd, Rob M. Ellam, John A. Higgins
2018, Journal of Analytical Atomic Spectrometry (33) 175-186
Potassium is a major component in continental crust, the fourth-most abundant cation in seawater, and a key element in biological processes. Until recently, difficulties with existing analytical techniques hindered our ability to identify natural isotopic variability of potassium isotopes in terrestrial materials. However, measurement precision has greatly improved and a...
Discrete choice modeling of season choice for Minnesota turkey hunters
Susan A. Schroeder, David C. Fulton, Louis Cornicelli, Steven S. Merchant
2018, Journal of Wildlife Management (82) 457-465
Recreational turkey hunting exemplifies the interdisciplinary nature of modern wildlife management. Turkey populations in Minnesota have reached social or biological carrying capacities in many areas, and changes to turkey hunting regulations have been proposed by stakeholders and wildlife managers. This study employed discrete stated choice modeling to enhance understanding of...
Lack of observed movement response to lead exposure of California condors
Sharon A. Poessel, Joseph Brandt, Linda Uyeda, Molly Astell, Todd E. Katzner
2018, Journal of Wildlife Management (82) 310-318
Lead poisoning is an important conservation concern for wildlife, and scavenging birds are especially at risk from consumption of carcasses of animals killed with lead ammunition. Because current methods to identify lead exposure require animal capture and blood collection, management would benefit from the development of a less costly and...
Seafloor fluid seeps on Kimki Ridge, offshore southern California: Links to active strike-slip faulting
James E. Conrad, Nancy G. Prouty, Maureen A. L. Walton, Jared W. Kluesner, Katherine L. Maier, Mary McGann, Daniel S. Brothers, Emily C. Roland, Peter Dartnell
2018, Deep-Sea Research Part II: Topical Studies in Oceanography (150) 82-91
The Kimki Ridge fluid seeps are located in western Catalina Basin about 60 km southwest of the southern California mainland and at a water depth of approximately 1100 m. Multichannel seismic reflection profiles collected by the U.S. Geological Survey (USGS) in 2014 show acoustic transparency within the Kimki Ridge, suggesting the possibility of fluid seeps and possible sub-seafloor...
Timelines and mechanisms of wildlife population recovery following the Exxon Valdez oil spill
Daniel Esler, Brenda E. Ballachey, Craig O. Matkin, Daniel Cushing, Robert Kaler, James L. Bodkin, Daniel Monson, George G. Esslinger, Kimberly A. Kloecker
2018, Deep Sea Research Part II: Topical Studies in Oceanography (147) 36-42
Research and monitoring activities over the 28 years since the T/V Exxon Valdez ran aground and spilled oil into Prince William Sound, Alaska have led to an improved understanding of how wildlife populations were damaged, as well as the mechanisms and timelines of recovery. A key finding was that for some...
Longitudinal thermal heterogeneity in rivers and refugia for coldwater species: Effects of scale and climate change
A.H. Fullerton, Christian E. Torgersen, J.J. Lawer, E. A. Steel, J. L. Ebersole, S.Y. Lee
2018, Aquatic Sciences (80) 15
Climate-change driven increases in water temperature pose challenges for aquatic organisms. Predictions of impacts typically do not account for fine-grained spatiotemporal thermal patterns in rivers. Patches of cooler water could serve as refuges for anadromous species like salmon that migrate during summer. We used high-resolution remotely sensed water temperature data...
Small-scale genetic structure in an endangered wetland specialist: possible effects of landscape change and population recovery
Charles B. van Rees, J. Michael Reed, Robert E. Wilson, Jared G. Underwood, Sarah A. Sonsthagen
2018, Conservation Genetics (19) 129-142
The effects of anthropogenic landscape change on genetic population structure are well studied, but the temporal and spatial scales at which genetic structure can develop, especially in taxa with high dispersal capabilities like birds, are less well understood. We investigated population structure in the Hawaiian gallinule (Gallinula galeata...
Tracing biogeochemical subsidies from glacier runoff into Alaska's coastal marine food webs
Mayumi L. Arimitsu, Keith A. Hobson, D’Arcy N. Webber, John F. Piatt, Eran W. Hood, Jason B. Fellman
2018, Global Change Biology (24) 387-398
Nearly half of the freshwater discharge into the Gulf of Alaska originates from landscapes draining glacier runoff, but the influence of the influx of riverine organic matter on the trophodynamics of coastal marine food webs is not well understood. We quantified the ecological impact of riverine organic matter subsidies to...
Post-wildfire landscape change and erosional processes from repeat terrestrial lidar in a steep headwater catchment, Chiricahua Mountains, Arizona, USA
Stephen B. DeLong, Ann M. Youberg, Whitney M. DeLong, Brendan P. Murphy
2018, Geomorphology (300) 13-30
Flooding and erosion after wildfires present increasing hazard as climate warms, semi-arid lands become drier, population increases, and the urban interface encroaches farther into wildlands. We quantify post-wildfire erosion in a steep, initially unchannelized, 7.5 ha headwater catchment following the 2011 Horseshoe 2 Fire in the Chiricahua Mountains of southeastern Arizona....