Hierarchial mark-recapture models: a framework for inference about demographic processes
W.A. Link, R. J. Barker
2004, Animal Biodiversity and Conservation (27) 441-449
The development of sophisticated mark-recapture models over the last four decades has provided fundamental tools for the study of wildlife populations, allowing reliable inference about population sizes and demographic rates based on clearly formulated models for the sampling processes. Mark-recapture models are now routinely described by large numbers of parameters....
Occupancy as a surrogate for abundance estimation
D.I. MacKenzie, J.D. Nichols
2004, Animal Biodiversity and Conservation (27) 461-467
In many monitoring programmes it may be prohibitively expensive to estimate the actual abundance of a bird species in a defined area, particularly at large spatial scales, or where birds occur at very low densities. Often it may be appropriate to consider the proportion of area occupied by the...
Demographic analysis of dormancy and survival in the terrestrial orchid Cypripedium reginae
Marc Kery, Katharine B. Gregg
2004, Journal of Ecology (92) 686-695
1. We use capture-recapture models to estimate the fraction of dormant ramets, survival and state transition rates, and to identify factors affecting these rates, for the terrestrial orchid Cypripedium reginae. We studied two populations in West Virginia, USA, for 11 years and investigated relationships between grazing and demography. Abe Run's...
Contaminant exposure and reproductive success of Ospreys (Pandion haliaetus) nesting in Chesapeake Bay regions of concern
Barnett A. Rattner, P. C. McGowan, N. H. Golden, Jeff S. Hatfield, P. C. Toschik, R.F. Lukei Jr., R. C. Hale, I. Schmitz-Afonso, C.P. Rice
2004, Archives of Environmental Contamination and Toxicology (47) 126-140
The Chesapeake Bay osprey population has more than doubled in size since restrictions were placed on the production and use of DDT and other toxic organochlorine contaminants in the 1970s. Ospreys are now nesting in the most highly polluted portions of the Bay. In 2000 and 2001, contaminant exposure and...
Assessing the fit of site-occupancy models
D.I. MacKenzie, L.L. Bailey
2004, Journal of Agricultural, Biological, and Environmental Statistics (9) 300-318
Few species are likely to be so evident that they will always be detected at a site when present. Recently a model has been developed that enables estimation of the proportion of area occupied, when the target species is not detected with certainty. Here we apply this modeling approach to...
Population dynamics of the California Spotted Owl (Strix occidentalis occidentalis): a meta-analysis
A.B. Franklin, R. J. Gutierrez, J.D. Nichols, M.E. Seamans, Gary C. White, G.S. Zimmerman, J.E. Hines, T.E. Munton, W.S. LaHaye, J.A. Blakesley, G.N. Steger, B.R. Noon, D.W.H. Shaw, J.J. Keane, T. L. McDonald, S. Britting
2004, Ornithological Monographs No. 54.
We conducted a meta-analysis to provide a current assessment of the population characteristics of California Spotted Owls (Strix occidentalis occidentalis) resident on four study areas in the Sierra Nevada and one study area in southern California. Our meta-analysis followed rigorous a priori analysis protocols, which we derived through extensive...
Biological control of ticks
M. Samish, H. Ginsberg, I. Glazer
A.S. Bowman, P. Nuttall, editor(s)
2004, Book chapter, Ticks: Biology, Disease & Control
Ticks have numerous natural enemies, but only a few species have been evaluated as tick biocontrol agents (BCAs). Some laboratory results suggest that several bacteria are pathogenic to ticks, but their mode of action and their potential value as biocontrol agents remain to be determined. The most promising...
Modeling survival and movement of resident giant Canada goose populations in the Atlantic flyway
M.W. Miller, W. L. Kendall, J.B. Hestbeck
Timothy J. Moser, Ricky D. Lien, Kurt C. VerCauterren, Kenneth F. Abraham, David E. Andersen, John G. Bruggink, John M. Coluccy, David A. Graber, James O. Leafloor, David R. Luukkonen, Robert E. Trost, editor(s)
2004, Book chapter, Proceedings of the 2003 International Canada Goose Symposium: papers, abstracts, and posters from the Symposium held in Madison, Wisconsin, 19-21 March 2003
Distribution of resident giant Canada geese (Branta canadensis maxima) has changed markedly in the Atlantic Flyway in recent decades. This change may be related to habitat variation or to changes in hunting regulations. We attempt to assess impacts of hunting regulations on survival, movement, and harvest rate of...
Modeling birds: an overview
Jeff S. Hatfield
2004, Book chapter, Species Conservation and Management: Case Studies
On the use of capture-recapture models in mist-net studies
W. L. Kendall, J.R. Sauer, J.D. Nichols, R. Pradel, J.E. Hines
C. John Ralph, Erica H. Dunn, editor(s)
2004, Book chapter, Monitoring bird populations with mist nets
Capture-recapture models provide a statistical framework for estimating population parameters from mist-net data. Although Cormack-Jolly-Seber and related models have recently been used to estimate survival rates of birds sampled with mist nets, we believe that the full potential for use of capture-recapture models has not been realized by many researchers...
Mute swans: Natural (?) environmental indicators
D. Day
Matthew C. Perry, editor(s)
2004, Book chapter, Mute swans and their Chesapeake Bay habitats: proceedings of a symposium
The rapid expansion of the Chesapeake Bay's population of feral mute swans (Cygnus olar), coupled with a dramatic Bay-wide decline in submerged aquatic vegetation (SAV), has fueled much of the current debate surrounding the need for a management plan to protect the aquatic food resources that are critical to many...
Occupancy estimation and modeling for rare and elusive populations
D.I. MacKenzie, J. Andrew Royle, J.A. Brown, J.D. Nichols
William L. Thompson, editor(s)
2004, Book chapter, Sampling rare or elusive species : concepts, designs, and techniques for estimating population parameters
Species Conservation and Management: Case Studies
H.R. Akcakaya, M.A. Burgman, O. Kindvall, C.C. Wood, P. Sjogren-Gulve, Jeff S. Hatfield, M.A. McCarthy
2004, Book
This edited volume is a collection of population and metapopulation models for a wide variety of species, including plants, invertebrates, fishes, amphibians, reptiles, birds, and mammals. Each chapter of the book describes the application of RAMAS GIS 4.0 to one species, with the aim of demonstrating how various life...
Combined impacts of Black-crowned Night-Heron predation/disturbance and various management activities on Roseate Tern productivity in 2003, and testing of a video surveillance system for recording the diurnal and nocturnal behavior of terns and night-herons at Falkner Island, Stewart B. McKinney National Wildlife Refuge, Connecticut, in 2004: Report to U.S. Fish and Wildlife Service, Stewart B. McKinney National Wildlife Refuge, Westbrook, Connecticut and U.S. Fish and Wildlife Service, Region 5 Regional Office, Hadley, Massachusetts
J. A. Spendelow, M. Kuter
2004, Book
Falkner Island (FICT), a unit of the U.S. Fish and Wildlife Service's Stewart B. McKinney National Wildlife Refuge (SBMNWR) since 1985, is located in Long Island Sound 5 km south of Guilford, CT. For more than three decades it has been the site of the only large breeding colony...
Rhode Island Water Supply System Management Plan Database (WSSMP-Version 1.0)
Gregory E. Granato
2004, Open-File Report 2004-1231
In Rhode Island, the availability of water of sufficient quality and quantity to meet current and future environmental and economic needs is vital to life and the State's economy. Water suppliers, the Rhode Island Water Resources Board (RIWRB), and other State agencies responsible for water resources in Rhode Island need...
Chapter A5. Section 6.4.B. Low-Level Mercury
Michael Edward Lewis, Mark E. Brigham
2004, Techniques of Water-Resources Investigations 09-A5.6.4.B
Collecting and processing water samples for analysis of mercury at a low (subnanogram per liter) level requires use of ultratrace-level techniques for equipment cleaning, sample collection, and sample processing. Established techniques and associated quality-assurance (QA) procedures for the collection and processing of water samples for trace-element analysis at the part-per-billion...
The Evolving Landscape of the Columbia River Gorge: Lewis and Clark and Cataclysms on the Columbia
James E. O'Connor
2004, Oregon Historical Society Quarterly (105) 390-421
TAVELERS RETRACING LEWIS AND CLARKE JOURNEY to the Pacific over the past two hundred years have witnessed tre mendous change to the Columbia River Gorge and its pri mary feature, the Columbia River. Dams, reservoirs, timber harvest, altered fisheries, transportation infrastructure, and growth and shrinkage of communities have transformed the...
Using Mosix for Wide-Area Compuational Resources
Brian G. Maddox
2004, Open-File Report 2004-1091
One of the problems with using traditional Beowulf-type distributed processing clusters is that they require an investment in dedicated computer resources. These resources are usually needed in addition to pre-existing ones such as desktop computers and file servers. Mosix is a series of modifications to the Linux kernel that creates...
Coastal-change and glaciological maps of Antarctica
Richard S. Williams Jr.,(compiler)
2004, IMAP 2600
Changes in the area and volume of polar ice sheets are intricately linked to changes in global climate, and the resulting changes in sea level may severely impact the densely populated coastal regions on Earth. Melting of the West Antarctic part alone of the Antarctic ice sheet could cause a...
Metadata for ReVA logistic regression dataset
Andrew E. LaMotte
2004, Open-File Report 2004-1324
The U.S. Geological Survey in cooperation with the U.S. Environmental Protection Agency's Regional Vulnerability Assessment Program, has developed a set of statistical tools to support regional-scale, ground-water quality and vulnerability assessments. The Regional Vulnerability Assessment Program goals are to develop and demonstrate approaches to comprehensive, regional-scale assessments that effectively inform...
Distributed Processing of Projections of Large Datasets: A Preliminary Study
Brian G. Maddox
2004, Open-File Report 2003-117
Modern information needs have resulted in very large amounts of data being used in geographic information systems. Problems arise when trying to project these data in a reasonable amount of time and accuracy, however. Current single-threaded methods can suffer from two problems: fast projection with poor accuracy, or accurate projection...
Advection within shallow pore waters of a coastal lagoon, Florida
J.E. Cable, Jonathan B. Martin, Peter W. Swarzenski, Mary K. Lindenberg, Joel Steward
2004, Ground Water (42) 1011-1020
Ground water sources can be a significant portion of a local water budget in estuarine environments, particularly in areas with high recharge rates, transmissive aquifers, and permeable marine sediments. However, field measurements of ground water discharge are often incongruent with ground water flow modeling results, leaving many scientists unsure which...
SUTRA-MS: A version of SUTRA modified to simulate heat and multiple-solute transport
Hughes, D. Joseph, Ward E. Sanford
2004, Open-File Report 2004-1207
No abstract available....
Delineation of faults, fractures, foliation, and ground-water-flow zones in fractured-rock, on the southern part of Manhattan, New York, through use of advanced borehole-geophysical techniques
Frederick Stumm, Anthony Chu, Jack Monti Jr.
2004, Open-File Report 2004-1232
Advanced borehole-geophysical techniques were used to assess the geohydrology of crystalline bedrock in 20 boreholes on the southern part of Manhattan Island, N.Y., in preparation for construction of a third water tunnel for New York City. The borehole-logging techniques included natural gamma, single-point resistance, short-normal resistivity, mechanical and acoustic caliper,...
Simulation of ground-water flow in the Vevay Township area, Ingham County, Michigan
Carol L. Luukkonen, Andreanne Simard
2004, Open-File Report 2004-1270
Ground water is the primary source of water for domestic, public-supply, and industrial use within the Tri-County region that includes Clinton, Eaton, and Ingham Counties in Michigan. Because of the importance of this ground-water resource, numerous communities, including the city of Mason in Ingham County, have begun local Wellhead Protection...