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Publication Extents

Not all publications have extents, not all extents are completely accurate
A spatial machine learning model developed from noisy data requires multiscale performance evaluation: Predicting depth to bedrock in the Delaware River Basin, USA
Phillip J. Goodling, Kenneth Belitz, Paul Stackelberg, Brandon J. Fleming
2024, Environmental Modelling & Software (179)
Spatial machine learning models can be developed from observations with substantial unexplainable variability, sometimes called ‘noise’. Traditional point-scale metrics (e.g., R2) alone can be misleading when evaluating these models. We present a multi-scale performance evaluation (MPE) using two additional scales (distributional and geostatistical). We apply the MPE framework to predictions...
Back from the brink: Estimating daily and annual abundance of natural-origin salmon smolts from 30-years of mixed-origin capture-recapture data
Dalton Hance, John Plumb, Russell Perry, Kenneth Tiffan
2024, Fisheries Research (278)
Evaluating the status and trends of natural-origin anadromous fish populations over time requires robust estimates of out-migrating juvenile abundance. Information on abundance is typically acquired by capturing actively migrating fish as they pass stationary monitoring platforms. Challenges to estimation include protracted migration timing, temporally varying capture probabilities and the contemporaneous...
Modeling the mid-Piacenzian warm climate using the water isotope-enabled Community Earth System Model (iCESM1.2-ITPCAS)
Yong Sun, Baohuang Su, Harry J. Dowsett, Haibin Wu, Jun Hu, Christian Stepanek, Zhongyu Xiong, Xiayu Yuan, Gilles Ramstein
2024, Climate Dynamics (62) 7741-7761
The mid-Piacenzian Warm Period (MPWP, ~ 3.264–3.025 Ma) is the most recent example of a persistently warmer climate in equilibrium with atmospheric CO2 concentrations similar to today. Towards studying patterns and dynamics of a warming climate the MPWP is often compared to today. Following the Pliocene Model Intercomparison Project, Phase 2...
Viability modeling for decision support with limited data: A lizard case study
Ashley B.C. Goode, Nathan Allan, Conor P. McGowan
2024, Journal of Fish and Wildlife Managment (15) 70-86
Plateau spot-tailed earless lizards, Holbrookia lacerata, are a species of ground lizard in central Texas that are under review for listing as endangered under the US Endangered Species Act, but heretofore no predictive models of population dynamics or viability have been developed. We used limited available data and published demographic...
Alaskan glacial dust is an important iron source to surface waters of the Gulf of Alaska
John Crusius, Carsten Lao, Thomas M. Holmes, J. W. Murray
2024, Geophysical Research Letters (51)
This work evaluates glacial dust as a source of sediment, and associated iron (Fe), to the Fe-limited Gulf of Alaska (GoA). A reanalysis of GoA sediment data, using rare earth elements and thorium as provenance tracers, suggests a flux to the ocean surface of Copper River (AK) glacial dust, and...
Thermo-hydrologic processes governing supra-permafrost talik dynamics in discontinuous permafrost near Umiujaq (Québec, Canada)
Philippe Fortier, Nathan Young, Michelle A. Walvoord, Jean-Michel Lemieux, Aaron Mohammed
2024, Conference Paper, Proceedings of the 12th International Conference on Permafrost
Widespread supra-permafrost talik formation is currently recognized as a critical mechanism that could accelerate permafrost thaw in the Arctic (e.g., Connon et al. 2018; Farquharson et al. 2022). However, the trajectory of permafrost dynamics following talik formation may prove difficult to predict. Physically-based cryohydrogeologic models provide a powerful tool for understanding processes and factors controlling talik dynamics and,...
A history of cryohydrogeology modeling and recent advancements through the integration of solute transport
Barret L. Kurylyk, Julia Guimond, Aaron Mohammed, Victor F. Bense, Jeffrey M. McKenzie, Michelle A. Walvoord, Rob Jamieson, R. Bailey Strong
2024, Conference Paper, Proceedings of the 12th International Conference on Permafrost
Groundwater flow systems and permafrost are interrelated because permafrost thaw enhances permeability, while groundwater flow can advect heat and accelerate permafrost thaw (McKenzie et al. 2021). Given amplified climate change in cold regions, there is renewed interest in ‘cryohydrogeology’, the study of groundwater in cold regions. Many data-driven studies have...
Thermal and hydrological limitations on modeling carbon dynamics at wetland sites of discontinuous and continuous permafrost extent
Benjamin C. Maglio, Ruth Rutter, Tobey Carman, Colin W. Edgar, Eugénie S. Euskirchen, Hélène Genet, Andrew Mullen, Valeria Briones, Elchin Jafarov, Kristen L. Manies
2024, Conference Paper, Proceedings of the 12th International Conference on Permafrost
Accurate representation of cryohydrological processes is fundamental for biosphere models, particularly at high-latitudes, given their influence on carbon and permafrost dynamics in carbon-rich peatlands and wetlands. This study analyzes site-level simulations in moist and wet drainage conditions in continuous or discontinuous permafrost regions, using a terrestrial ecosystem model DVM-DOS-TEM. Functional...
Amur Falcon Falco amurensis
Jaume Orta, Guy M. Kirwan, Jeffrey S. Marks, Ryan C. Burner, Sundev Gombobaatar, Paul van, Chuenchom Hansasuta
2024, Book chapter, Birds of the world
No abstract available....
Iron oxyhydroxide-rich hydrothermal deposits at the high-temperature Fåvne vent field, Mohns Ridge
Caroline Gini, John Jamieson, Eoghan P. Reeves, Amy Gartman, Thibaut Barreyre, Michael G. Babechuk, Steffen L. Jorgensen, Katleen Robert
2024, Geochemistry, Geophysics, Geosystems (25)
The recently discovered Fåvne vent field, located at 3,040 m depth on the slow-spreading Mohns mid-ocean ridge between Greenland and Norway, is a high-temperature (≥250°C) vent field that is characterized by Fe oxyhydroxide-rich and S-poor chimneys and mounds. The vent field is located on both the hanging wall and footwall of...
Projected sea-level rise and high tide flooding at De Soto National Memorial, Florida
Hana R. Thurman, Nicholas M. Enwright, Michael J. Osland, Davina L. Passeri, Richard H. Day, Bethanie M. Simons
2024, Fact Sheet 2024-3016
IntroductionNational parks and preserves in the South Atlantic-Gulf Region contain valuable coastal habitats such as tidal wetlands and mangrove forests, as well as irreplaceable historic buildings and archeological sites located in low-lying areas. These natural and cultural resources are vulnerable to accelerated sea-level rise and escalating high tide flooding events....
Prediction of regional broadband strong ground motions using a teleseismic source model of the 18 April 2014 Mw 7.3 Papanoa, Mexico, earthquake
Carlos Mendoza, Stephen H. Hartzell, Leonardo Ramirez-Guzman, R. Martinez-Lopez
2024, Bulletin of the Seismological Society of America (14) 2524-2545
To estimate predicted ground motion from a teleseismic slip model, we use a low‐ and high‐frequency hybrid method to simulate the regional, strong ground motions observed following the 18 April 2014 moment magnitude (⁠Mw⁠) 7.3 Papanoa, Mexico, earthquake. To generate the regional ground motion at low frequencies (<1 Hz),...
From eDNA to decisions using a multi-method approach to restoration planning in streams
Andrea J. Adams, C. Kamoroff, Daniel R. Norton, Brian J. Halstead, R. L. Grasso, Patrick M. Kleeman, C. Mengelt, K. Powelson, T. Seaborn, C.S. Goldberg
2024, Scientific Reports (14)
Reintroduction efforts are increasingly used to mitigate biodiversity losses, but are frequently challenged by inadequate planning and uncertainty. High quality information about population status and threats can be used to prioritize reintroduction and restoration efforts and can transform ad hoc approaches into opportunities for improving conservation...
Dissolved arsenic concentrations in surface waters within the upper portions of the Klamath River Basin, Oregon and California
Marie Noele Croteau, Brent R. Topping, Rick A. Carlson
2024, Scientific Investigations Report 2024-5029
Arsenic toxicity is an environmental health problem. Levels of arsenic in surface waters at some locations in the Klamath River Basin in southern Oregon and northern California can exceed the U.S. Environmental Protection Agency (EPA) standard for drinking water. There are both anthropogenic and natural sources of arsenic. The Klamath...
System characterization report on the Gaofen-6
Aparajithan Sampath, Jon Christopherson, Seonkyung Park, Minsu Kim, Gregory L. Stensaas, Cody Anderson
2024, Open-File Report 2021-1030-M
Executive SummaryGaofen-6 represents a series of Chinese high-resolution Earth observation satellites. More than 12 satellites have been launched in the Gaofen series, beginning with Gaofen-1 in 2013. Satellites within the series have varying infrared, radar, and optical imaging capabilities. The primary goal for the satellites in this series is to...
Distribution, abundance, and breeding activities of the Least Bell's Vireo at Marine Corps Base Camp Pendleton, California—2020 annual report
Suellen Lynn, Michelle Treadwell, Barbara E. Kus
2024, Open-File Report 2024-1009
Executive SummaryThe purpose of this report is to provide the Marine Corps with an annual summary of abundance, breeding activity, demography, and habitat use of endangered Least Bell’s Vireos (Vireo bellii pusillus) at Marine Corps Base Camp Pendleton (MCBCP, or Base). Surveys for the Least Bell's Vireo were conducted...
Distribution, Abundance, and Breeding Activities of the Southwestern Willow Flycatcher at Marine Corps Base Camp Pendleton, California—2020 Annual Report
Scarlett L. Howell, Barbara E. Kus
2024, Open-File Report 2024-1005
Executive SummarySurveys for the endangered Southwestern Willow Flycatcher (Empidonax traillii extimus) were done at Marine Corps Base Camp Pendleton (MCBCP or “Base”), California, between May 4 and July 31, 2020. All of MCBCP’s historically occupied riparian habitat (core survey area) was surveyed for flycatchers in 2020. Additionally, one-fifth of the...
Effects of elevated pCO2 on bioenergetics and disease susceptibility in Pacific herring Clupea pallasii
Christopher Murray, Jacob L. Gregg, Ashley MacKenzie, Hiruni Jayasekara, Sophie Hall, Terrie Klinger, Paul Hershberger
2024, Marine Ecology Progress Series. (738) 225-242
Ocean acidification can affect the immune responses of fish, but effects on pathogen susceptibility remain uncertain. Pacific herring Clupea pallasii were reared from hatch under 3 CO2 partial pressure ( pCO2) treatments (ambient, ∼650 µatm; intermediate, ∼1500 µatm; high, ∼3000 µatm) through metamorphosis (98 d) to evaluate the effects of ocean acidification on bioenergetics...
Using an adaptive modeling framework to identify avian influenza spillover risk at the wild-domestic interface
Diann Prosser, Cody M. Kent, Jeffery D. Sullivan, Kelly A. Patyk, Mary-Jane McCool, Mia K. Torchetti, Kristina Lantz, Jennifer M. Mullinax
2024, Scientific Reports (14)
The wild to domestic bird interface is an important nexus for emergence and transmission of highly pathogenic avian influenza (HPAI) viruses. Although the recent incursion of HPAI H5N1 Clade 2.3.4.4b into North America calls for emergency response and planning given the unprecedented scale, readily available data-driven models are lacking. Here,...
Predicting responses to climate change using a joint species, spatially dependent physiologically guided abundance model
Christopher A. Custer, Joshua S. North, Erin M. Schliep, Michael R. Verhoeven, Gretchen J.A. Hansen, Tyler Wagner
2024, Ecology (105)
Predicting the effects of warming temperatures on the abundance and distribution of organisms under future climate scenarios often requires extrapolating species–environment correlations to climatic conditions not currently experienced by a species, which can result in unrealistic predictions. For poikilotherms, incorporating species' thermal physiology to inform extrapolations under novel thermal conditions...
Indications of preferential groundwater seepage feeding northern peatland pools
Henry Moore, Xavier Comas, Martin A. Briggs, Andrew S. Reeve, Lee Slater
2024, Journal of Hydrology (638)
Groundwater seepage from underlying permeable glacial sedimentary structures, such as eskers, has been hypothesized to directly feed pools in northern peat bogs. These hypotheses directly contradict classical peat bog models for ombrogenous systems, wherein meteoric water is the sole water input...
Evaluation of extinction risk for stream fishes within an urban riverscape using population viability analysis
Brock Huntsman, Kai Palenscar, Kerwin Russell, Brett Mills, Chris Jones, William Ota, Kurt E. Anderson, Heather Dyer, Fitsum Abadi, Marissa L. Wulff
2024, Aquatic Conservation: Marine and Freshwater Ecosystems (34)
1. The Santa Ana River in the Los Angeles region of California demonstrates common habitat degradation symptoms that are characteristic of the urban stream syndrome. These impacts have altered the Santa Ana River community structure, with few species as impacted as the native Santa Ana sucker (sucker; Pantosteus santaanae). 2. Consequently,...
Signatures of wave erosion in Titan’s coasts
Rose Elizabeth Palermo, Andrew D. Ashton, Jason M. Soderblom, Samuel P. D. Birch, Alexander G. Hayes, J. Taylor Perron
2024, Science Advances (10)
The shorelines of Titan’s hydrocarbon seas trace flooded erosional landforms such as river valleys; however, it is unclear whether coastal erosion has subsequently altered these shorelines. Spacecraft observations and theoretical models suggest that wind may cause waves to form on Titan’s seas, potentially driving coastal erosion, but the observational evidence...
Microbial communities in standing dead trees in ghost forests are largely aerobic, saprophytic, and methanotrophic
Mary Jane Carmichael, Melinda Martinez, Suzanna L. Bräuer, Marcelo Ardón
2024, Current Microbiology (81)
Standing dead trees (snags) are recognized for their influence on methane (CH4) cycling in coastal wetlands, yet the biogeochemical processes that control the magnitude and direction of fluxes across the snag-atmosphere interface are not fully elucidated. Herein, we analyzed microbial communities and fluxes at one height...