Life-history model for sockeye salmon (Oncorhynchus nerka) at Lake Ozette, northwestern Washington—Users' guide
Andrea Woodward, Mike Haggerty, Patrick Crain
2019, Open-File Report 2019-1031
Salmon populations spawning in the Lake Ozette watershed of northwestern Washington were once sufficiently abundant to support traditional Tribal fisheries, and were later harvested by settlers. However, in 1974 and 1975, the sockeye salmon (Oncorhynchus nerka) harvest decreased to 0 from a high of more than 17,500 in 1949, thus...
Grizzly bear depredation on grazing allotments in the Yellowstone ecosystem
Smith L. Wells, Lance B. McNew, Daniel B. Tyers, Frank T. van Manen, Daniel J. Thompson
2019, Journal of Wildlife Management (83) 556-566
Grizzly bear (Ursus arctos) conflicts with humans, including livestock depredation on public land grazing allotments, have increased during the last several decades within the Greater Yellowstone Ecosystem (GYE) in the western United States as the grizzly bear population has grown in number and occupied range. Minimizing conflicts and improving conservation efficacy...
Effects of climate, regulation, and urbanization on historical flood trends in the United States
Glenn Hodgkins, Robert Dudley, Stacey Archfield, Benjamin Renard
2019, Journal of Hydrology (573) 697-709
Many studies have analyzed historical trends in annual peak flows in the United States because of the importance of flooding to bridges and other structures, and the concern that human influence may increase flooding. To help attribute causes of historical peak-flow changes, it is important to separate basins by characteristics...
Identifying occupancy model inadequacies: Can residuals separately assess detection and presence?
Wilson Wright, Kathryn M. Irvine, Megan D. Higgs
2019, Ecology (100)
Occupancy models are widely applied to estimate species distributions, but few methods exist for model checking. Thorough model assessments can uncover inadequacies and allow for deeper ecological insight by exploring structure in the observed data not accounted for by a model. We introduce occupancy model residual definitions that utilize the...
Geospatial data mining for digital raster mapping
Bruce K. Wylie, Neal J. Pastick, Joshua J. Picotte, Carol Deering
2019, GIScience and Remote Sensing (56) 406-429
We performed an in-depth literature survey to identify the most popular data mining approaches that have been applied for raster mapping of ecological parameters through the use of Geographic Information Systems (GIS) and remotely sensed data. Popular data mining approaches included decision trees or “data mining” trees which consist of...
Diverse late‐stage crystallization and storage conditions in melt domains from the Youngest Toba Tuff revealed by age and compositional heterogeneity in the last increment of accessory phase growth
Casey R. Tierney, Mary R. Reid, Jorge A. Vazquez, Craig A. Chesner
2019, Contributions to Mineralogy and Petrology (174)
The chemical record contained within the nal increment of growth on crystals is utilized to reveal the dynamics and time- scales of magma assembly and storage before eruption of the cataclysmic 2800 km3 Youngest Toba Tu (YTT), Indonesia. In situ U–Th disequilibrium dates and trace element concentrations were...
Development of a quantitative PCR method for screening ichthyoplankton samples for bigheaded carps
Andrea K. Fritts, Brent C. Knights, James H. Larson, Jon Amberg, Christopher M. Merkes, Tariq Tajjioui, Steven E. Butler, Matthew J. Diana, David H. Wahl, Michael J. Weber, John D. Waters
2019, Biological Invasions (21) 1143-1153
Monitoring ichthyoplankton is useful for identifying reproductive fronts and spawning locations of bigheaded carps (Hypophthalmichthys spp.). Unfortunately, sorting and identifying ichthyoplankton to monitor for bigheaded carp reproduction is time consuming and expensive. Traditional methods require frequent egg-larvae sampling, sorting of all samples to obtain presumptively identified bigheaded carp, and genetic...
Increased nesting success of Hawaii Elepaio in response to the removal of invasive black rats
Paul C. Banko, Kelly Jaenecke, Robert W. Peck, Kevin W. Brinck
2019, Condor (121)
In Hawaii and other oceanic islands with few native land mammals, black rats (Rattus rattus) are among the most damaging invasive vertebrate species to native forest bird populations and habitats, due to their arboreal behavior and generalist foraging habits and habitat use. We evaluated the nesting response of Hawaii Elepaio...
Consequences of ignoring spatial variation in population trend when conducting a power analysis
Emily L. Weiser, James E. Diffendorfer, Laura Lopez-Hoffman, Darius J. Semmens, Wayne E. Thogmartin
2019, Ecography (42) 836-844
Long-term, large-scale monitoring programs are becoming increasingly common to document status and trends of wild populations. A successful program for monitoring population trend hinges on the ability to detect the trend of interest. Power analyses are useful for quantifying the sample size needed for trend detection, given expected variation in...
AVO-G2S: A modified, open-source Ground-to-Space atmospheric specification for infrasound modeling
Hans Schwaiger, Alexandra M. Iezzi, David Fee
2019, Computers & Geosciences (125) 90-97
To facilitate infrasound propagation studies, we present AVO-G2S, an open-source, Ground-to-Space model which provides temperature and wind specifications from the surface to an altitude of 225 km. This model provides a means of smoothly characterizing atmospheric conditions using multiple numerical weather prediction forecast and reanalysis products, along with upper-atmospheric...
Simulating the effects of climate variability on waterbodies and wetland-dependent birds in the Prairie Pothole Region
N.E. Mcintyre, G. Liu, J. Gorzo, C.K. Wright, Glenn R. Guntenspergen, F. Schwartz
2019, Ecosphere (10) 1-18
Understanding how bird populations respond to changes in waterbody availability in the climatically variable Prairie Pothole Region (PPR) of North America hinges on being able to couple hydrological and climate modeling to represent potential future landscapes. Model experiments run with the Pothole Complex Hydrologic Model using...
Investigation of recent decadal-scale cyclical fluctuations in salinity in the lower Colorado river
Fred D. Tillman, Alissa L. Coes, David W. Anning, Jon P. Mason, Tyler B. Coplen
2019, Journal of Environmental Management 442-452
Beginning in the late 1970s, 10- to 15-year cyclical oscillations in salinity were observed at lower Colorado River monitoring sites, moving upstream from the international border with Mexico, above Imperial Dam, below Hoover Dam, and at Lees Ferry. The cause of these cyclical...
Patterns of primary production and ecological drought in Yellowstone
David P. Thoma, Seth M. Munson, Ann W. Rodman, Roy Renkin, Heidi M. Anderson, Stephanie D. Wacker
2019, Yellowstone Science (27) 34-39
Introduction: Photosynthesis converts sunlight into stored energy in millions of leaves, flowers and seeds that maintain the web of life in Yellowstone. This transformation of energy fixes carbon, supplies organic matter to soils, and can become fuel for wildfire. As the first link of the food chain, new plant...
Research, monitoring, and evaluation of emerging issues and measures to recover the Snake River fall Chinook Salmon ESU
Kenneth F. Tiffan, Russell W. Perry, John M. Plumb, Dalton Hance, Brad Bickford, Tobyn Rhodes
2019, Report
The portion of the Snake River fall Chinook Salmon Oncorhynchus tshawytscha ESU that spawns upstream of Lower Granite Dam transitioned from low to high abundance during 1992–2018 in association with U.S. Endangered Species Act recovery efforts and other federally mandated actions. This annual report focuses on (1) numeric and habitat...
Geology of the Mineral and Lake Anna West Quadrangles, Virginia
Mark W. Carter, William C. Burton, Ryan J. McAleer, Mary DiGiacomo-Cohen, R. Tyler Sauer
2019, Virginia Division of Geology and Mineral Resources Publication 189
This map product is a cooperator series publication and, as such, does not have a specific abstract. Geologic mapping for this map product was completed between 2014 and 2017, with most of the field work occurring between January 2016 and May 2017. Numerous foot traverses were completed along creeks and roads...
A revised continuous surface elevation model for modeling
Rueen-Fang Wang, Eli Ateljevich, Theresa A. Fregoso, Bruce E. Jaffe
2019, Book chapter, Methodology for flow and salinity estimates in the Sacramento-San Joaquin Delta and Suisun Marsh, 39th Annual Progress Report to the State Water Resources Control Board
A digital elevation model (DEM) is an essential component of any hydrodynamic model. The Delta Modeling Section (Section) has maintained a database of bathymetry soundings and levee surveys for decades and published a 10-meter (10m) DEM for the San Francisco Bay and Sacramento-San Joaquin Delta (Delta) (California Department of Water...
Changes in body condition and diet of lotic Smallmouth Bass across two flow regimes during summer months at the southern extent of their native range
Christopher R. Middaugh, Daniel D. Magoulick
2019, American Fisheries Society Symposium (87) 93-110
The Ozark Plateau is located at the southern extent of native Smallmouth Bass Micropterus dolomieu range and water temperature and drought conditions during summer months may potentially affect growth of Smallmouth Bass in this region. Groundwater streams in the region do not warm to the same extent as runoff streams...
Report of the technical expert workshop: Developing recommendations for field response, captive management, and rehabilitation of sea turtles with fibropapillomatosis
Brian Stacy, Allen M. Foley, Thierry M. Work, Anne Lauritsen, Barbara Schroeder, Stacy A. Hargrove, Jennifer L. Keene
2019, NOAA Technical Memorandum NMFS-OPR-60
Fibropapillomatosis (FP) is a disease of sea turtles that primarily manifests as tumors of the skin. Strandings of green turtles with this disease have dramatically increased in the Southeast U.S. over the last decade, necessitating a review of various practices related to the capture, handling, and treatment of afflicted turtles....
Understanding the central Great Plains as a coupled climatic-hydrological-human system: Lessons learned in operationalizing interdisciplinary collaboration
Marcellus M. Caldas, Martha E. Mather, Jason S. Bergtold, Melinda Daniels, Gabriel Granco, Joseph Aistrup, David A. Haukos, Aleksey Y. Sheshukov, Matthew R. Sanderson, Jessica L. Heier Stamm
2019, Book chapter, Collaboration across boundaries for social-ecological systems science
This chapter discusses an interdisciplinary and transdisciplinary project to understand the interactions of agriculture, climate, and water resources in the Central Great Plains as a coupled natural-human system. We focus on the Smoky Hills Watershed in Kansas, where we gathered socioeconomic, hydrological, and climatic data, along with ecological data on...
Comparison of groundwater age models for assessing nitrate loading, transport pathways, and management options in a complex aquifer system
E.H. Koh, E. Lee, D. Kaown, Christopher Green, D.C. Koh, K.K Lee, Sangil Lee
2019, Hydrological Processes (32) 923-938
In an aquifer system with complex hydrogeology, mixing of groundwater with different ages could occur associated with various flow pathways. In this study, we applied different groundwater age estimation techniques (lumped parameter model, and numerical model) to characterize groundwater age distributions and the major pathways of nitrate contamination in the...
The accuracy of ecological flow metrics derived using a physics-based distributed rainfall-runoff model in the Great Plains, USA
Thomas A. Worthington, Shannon K. Brewer, Baxter Viex, Jonathan G. Kennen
2019, Ecohydrology (12)
The development of a hydrologic foundation, essential for advancing our understanding of flow-ecology relationships, was developed using the high-resolution physics-based distributed rainfall–runoff model Vflo in a semi-arid region. We compared the accuracy and bias associated with flow metrics that were generated using Vflo, gauge data, and drainage area ratios at both...
Factors controlling landslide frequency-area distributions
Hakan Tanyas, Cees J. van Westen, Kate E. Allstadt, Randall W. Jibson
2019, Earth Surface Processes and Landforms (44) 900-917
A power‐law relation for the frequency–area distribution (FAD) of medium and large landslides (e.g. tens to millions of square meters) has been observed by numerous authors. But the FAD of small landslides diverges from the power‐law distribution, with a rollover point below which frequencies decrease for...
Prominence of the tropics in the recent rise of global nitrogen pollution
Minjin Lee, Elena Shevliakova, Charles A. Stock, Sergey Malyshev, Paul C. D. Milly
2019, Nature Communications (10)
Nitrogen (N) pollution is shaped by multiple processes, the combined effects of which remain uncertain, particularly in the tropics. We use a global land biosphere model to analyze historical terrestrial-freshwater N budgets, considering the effects of anthropogenic N inputs, atmospheric CO2, land use, and climate. We estimate that globally, land...
Lakes as paleoseismic records in a seismically-active, low-relief area (Rieti Basin, central Italy)
Claire Archer, Paula Noble, Michael R. Rosen, Leonardo Sagnotti, Fabio Fiorindo, Gianluca Piovesan, Scott Mensing, Alessandro Michetti
2019, Quaternary Science Reviews (211) 186-207
Small lakes in low relief areas are atypical candidates for studies on paleoseismicity, but their sediments can contain seismically induced event layers (seismites) generated through strong ground shaking, sediment transport, hydrological reorganization and/or changes in groundwater chemistry and flow. Lakes Lungo and Ripasottile are shallow lakes (<10m deep) located in...
Assessing patterns of annual change to permafrost bluffs along the North Slope coast of Alaska using high-resolution imagery and elevation models
Ann E. Gibbs, Matt Nolan, Bruce M. Richmond, Alexander G. Snyder, Li Erikson
2019, Geomorphology (336) 152-164
Coastal permafrost bluffs at Barter Island, on the North Slope, Beaufort Sea Coast of Alaska are among the most rapidly eroding along Alaska’s coast, having retreated up to 132 m between 1955 and 2015. Here we quantify rates and patterns of change over a single year using very-high resolution orthophotomosaics...